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The map label for this gene is rolB [H]

Identifier: 16119816

GI number: 16119816

Start: 6139

End: 6870

Strand: Direct

Name: rolB [H]

Synonym: Atu6003

Alternate gene names: 16119816

Gene position: 6139-6870 (Clockwise)

Preceding gene: 16119814

Following gene: 159162007

Centisome position: 2.87

GC content: 49.32

Gene sequence:

>732_bases
ATGCACACCTCACTAATGTCTTACAATCAAAATATGATACCCTCAGGGGATGATCGCCCCGTTTTTCCGACAATTGATTT
GTTCGCAAACACCTCCCTGGAAGAACTTCAGCAGAGCCTATGCGCGGCGGTCGCAAATTATAGGGATTTCCTCACTCGAA
AGATTCTCCCCTTCCAGCAATCTTGGGTTGTCCGAGTCCTGTCCGAATCCGGCCTAGACGAAGAGACTCTGCGCGCAATC
AAAAGCTGTGTCTTCACGCCGTGTTGCAGCATTCCTGGCGCCGTCCAGCCAGATAGAATTTGCCAACATGACTCACCAAT
CTACATCTACACCTCCCTGAATTTATTATCGCAATACGTCGAAGGAAAAACCCTATTGCGGTGCTATCGCAAATTTGTGC
TGGCTTCATCACTCCCACCATACCGAACGGATATTCCAGCAGAGGAGCTCAAGAACGTACTCAACAGTATCTTGCCAGGC
GCCTATAGCATGCCGCATGCCGTAAGCTGCTTCGTGGCCATTTTGCCCAGTAAGAAATTCACGATCAGCATGTCCAAAAT
CACCACCCGTGGTGGCGCGGAGGAGCATTTTGTCGTTTTCAGTAGAGAAGAGAACGACATAATCCCATACGACATCGTCG
CAGTGGGGAAGACGCTGTTCTCCCAGTCGGACGAGGAATTTGGTTTGCCAAATCTCAGCTTCGATGAACTACAGAACCTT
ATCAGCACTTAA

Upstream 100 bases:

>100_bases
TGCGGCACGAGCGAAATAGTAACCTAAACTTTCTTTATTGCGATGTTTGACAATCACTGGGCAGGTGAGTGTTATAATAG
AGGGCCATTAGCCTTCGGCC

Downstream 100 bases:

>100_bases
TCTGTTTTCTATTCGTGGATAGAAAACAACCCTAGTGTATGGGATCAATATAACCATGCTAGTGCCACTGTGTATCTCCC
GATGAGACATGTAATGATAT

Product: C' protein

Products: NA

Alternate protein names: ROL B protein [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MHTSLMSYNQNMIPSGDDRPVFPTIDLFANTSLEELQQSLCAAVANYRDFLTRKILPFQQSWVVRVLSESGLDEETLRAI
KSCVFTPCCSIPGAVQPDRICQHDSPIYIYTSLNLLSQYVEGKTLLRCYRKFVLASSLPPYRTDIPAEELKNVLNSILPG
AYSMPHAVSCFVAILPSKKFTISMSKITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDELQNL
IST

Sequences:

>Translated_243_residues
MHTSLMSYNQNMIPSGDDRPVFPTIDLFANTSLEELQQSLCAAVANYRDFLTRKILPFQQSWVVRVLSESGLDEETLRAI
KSCVFTPCCSIPGAVQPDRICQHDSPIYIYTSLNLLSQYVEGKTLLRCYRKFVLASSLPPYRTDIPAEELKNVLNSILPG
AYSMPHAVSCFVAILPSKKFTISMSKITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDELQNL
IST
>Mature_243_residues
MHTSLMSYNQNMIPSGDDRPVFPTIDLFANTSLEELQQSLCAAVANYRDFLTRKILPFQQSWVVRVLSESGLDEETLRAI
KSCVFTPCCSIPGAVQPDRICQHDSPIYIYTSLNLLSQYVEGKTLLRCYRKFVLASSLPPYRTDIPAEELKNVLNSILPG
AYSMPHAVSCFVAILPSKKFTISMSKITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDELQNL
IST

Specific function: Induces differentiation and growth of neoplastic roots (hairy roots). Seems to function as a tyrosine phosphatase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006064 [H]

Pfam domain/function: PF02027 RolB_RolC [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 27247; Mature: 27247

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSLMSYNQNMIPSGDDRPVFPTIDLFANTSLEELQQSLCAAVANYRDFLTRKILPFQQ
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SWVVRVLSESGLDEETLRAIKSCVFTPCCSIPGAVQPDRICQHDSPIYIYTSLNLLSQYV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEHHHHHHHH
EGKTLLRCYRKFVLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCE
TISMSKITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDELQNL
EEEHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IST
HCC
>Mature Secondary Structure
MHTSLMSYNQNMIPSGDDRPVFPTIDLFANTSLEELQQSLCAAVANYRDFLTRKILPFQQ
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SWVVRVLSESGLDEETLRAIKSCVFTPCCSIPGAVQPDRICQHDSPIYIYTSLNLLSQYV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEHHHHHHHH
EGKTLLRCYRKFVLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCE
TISMSKITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDELQNL
EEEHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IST
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1915286; 8596628 [H]