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The map label for this gene is 16119814

Identifier: 16119814

GI number: 16119814

Start: 2389

End: 3072

Strand: Direct

Name: 16119814

Synonym: Atu6001

Alternate gene names: NA

Gene position: 2389-3072 (Clockwise)

Preceding gene: NA

Following gene: 16119816

Centisome position: 1.12

GC content: 48.1

Gene sequence:

>684_bases
ATGTACTACGAACGACCCGTGTTCGACATAGTCGATACCTGGGAGATAAGAGAACGGGAGGTACTTAAACCCGTCCTGAG
CGTAGCTGAAGAAGATTACTGCTATTTCGTGCAGAACACGGTTGCCTCCGCGCAGCGCTCCTGGGTTGATTTAGTCGCCA
ATCTTTTTAACTCTCCAGATTCTGACATTGATGACGCGCTGAATCGCTTTGCAGACGCGCCCTGCTTGCATGGGCCGACA
CTCGAGCCGATGAACCTGATACTCAAAGGTTCTCCGATGTATGTTTATTGCTCGTTCGAAGAGATGAGAAGTTGTGCAAC
CAAACGATTCTATGAGGGCATTTCGAATCGCGGCGTGGTGATTTGCACAGTTCCACCCTATGCTGAGGGGGTAACGAGAG
ATGATATGAGTGTCTGGCAAAATCAGGCCTGTGTGAATACCTGCAGCGGGAAGAACGATTTGGATGCATACATTGCATTC
TTGCCAACCAGTTCGCTTCAGGAGTCGAGCTATTGGCACACGAAGAATGGTATCTATAGTTTCTTGGCACCGTCGCAAAC
GGATGCCTTTTGCTGCGAAATACTTTGTGTGGGGCGGGCTCTTTTTGAAGATAGGAGCCGTAAAGAGAAACTCAGAAATT
GTTTGTTGAAGCTTCTCAATTACCGTCTCAAGCTGTTATTTTGA

Upstream 100 bases:

>100_bases
TGCGGCAGTGTATAGAAGCCTCATACTTTACGGACGCGCGCTCTGCAGTTAAAGTCGCTAGATTGGCAGGGGGACCTGGG
AAGCACCTCCAAAGTGCAGA

Downstream 100 bases:

>100_bases
TGGCAAATGAGTTTACTGGCCCAATATCTGGGGCTGAAAGGGAGTGAAGTTAAAAGGTCCGAATATATCTAATGGCGCTT
ACGCTTGGTCGGCTTTTTGC

Product: 5 protein

Products: NA

Alternate protein names: Gene 5 protein [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MYYERPVFDIVDTWEIREREVLKPVLSVAEEDYCYFVQNTVASAQRSWVDLVANLFNSPDSDIDDALNRFADAPCLHGPT
LEPMNLILKGSPMYVYCSFEEMRSCATKRFYEGISNRGVVICTVPPYAEGVTRDDMSVWQNQACVNTCSGKNDLDAYIAF
LPTSSLQESSYWHTKNGIYSFLAPSQTDAFCCEILCVGRALFEDRSRKEKLRNCLLKLLNYRLKLLF

Sequences:

>Translated_227_residues
MYYERPVFDIVDTWEIREREVLKPVLSVAEEDYCYFVQNTVASAQRSWVDLVANLFNSPDSDIDDALNRFADAPCLHGPT
LEPMNLILKGSPMYVYCSFEEMRSCATKRFYEGISNRGVVICTVPPYAEGVTRDDMSVWQNQACVNTCSGKNDLDAYIAF
LPTSSLQESSYWHTKNGIYSFLAPSQTDAFCCEILCVGRALFEDRSRKEKLRNCLLKLLNYRLKLLF
>Mature_227_residues
MYYERPVFDIVDTWEIREREVLKPVLSVAEEDYCYFVQNTVASAQRSWVDLVANLFNSPDSDIDDALNRFADAPCLHGPT
LEPMNLILKGSPMYVYCSFEEMRSCATKRFYEGISNRGVVICTVPPYAEGVTRDDMSVWQNQACVNTCSGKNDLDAYIAF
LPTSSLQESSYWHTKNGIYSFLAPSQTDAFCCEILCVGRALFEDRSRKEKLRNCLLKLLNYRLKLLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006064 [H]

Pfam domain/function: PF02027 RolB_RolC [H]

EC number: NA

Molecular weight: Translated: 26022; Mature: 26022

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYERPVFDIVDTWEIREREVLKPVLSVAEEDYCYFVQNTVASAQRSWVDLVANLFNSPD
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDIDDALNRFADAPCLHGPTLEPMNLILKGSPMYVYCSFEEMRSCATKRFYEGISNRGVV
CCHHHHHHHHCCCCCCCCCCCCCHHEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCEE
ICTVPPYAEGVTRDDMSVWQNQACVNTCSGKNDLDAYIAFLPTSSLQESSYWHTKNGIYS
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCCCCEECCCCCEE
FLAPSQTDAFCCEILCVGRALFEDRSRKEKLRNCLLKLLNYRLKLLF
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYYERPVFDIVDTWEIREREVLKPVLSVAEEDYCYFVQNTVASAQRSWVDLVANLFNSPD
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDIDDALNRFADAPCLHGPTLEPMNLILKGSPMYVYCSFEEMRSCATKRFYEGISNRGVV
CCHHHHHHHHCCCCCCCCCCCCCHHEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCEE
ICTVPPYAEGVTRDDMSVWQNQACVNTCSGKNDLDAYIAFLPTSSLQESSYWHTKNGIYS
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCCCCEECCCCCEE
FLAPSQTDAFCCEILCVGRALFEDRSRKEKLRNCLLKLLNYRLKLLF
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469115; 8220492; 6327292 [H]