Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is virE0

Identifier: 159162002

GI number: 159162002

Start: 205684

End: 205935

Strand: Direct

Name: virE0

Synonym: Atu6188

Alternate gene names: 159162002

Gene position: 205684-205935 (Clockwise)

Preceding gene: 159162001

Following gene: 16119804

Centisome position: 96.01

GC content: 56.35

Gene sequence:

>252_bases
ATGCACGGTGATGATGTTGATCGGACGGCTTTCGTCCCGCGCAGGCTGCCGGCTGAAGCCGCTTACGTCGATAGTCAAGT
TGACCTGGCGGCAAACCGACAACCTCACTGTGTGACTTGTTTTGAGCGACTTTTGGTTCAAGAGAAAGATGAAAACCGTC
GACGATTGTGGGCTTCCGGCAAAGCATGCGCCACGTCTGAAGAGAGTTGTGCAGGAGGCCCTACACTCGCACCGGGCCAT
TCGGGGCCATGA

Upstream 100 bases:

>100_bases
ATGACGGAGGCTCGGATGGTAGATTCACCGAAGGCTCAATTCTATTAGGAGTCTTGATTGTGTCCGAAGAGTGACTGCCG
CTGCAGCAGCCTAGAAAGCA

Downstream 100 bases:

>100_bases
AGATGGAGCAAACCTTAATTTGCACCGATAATTTTCCGTTCGATGGATTTGGGCTGGGCAGGATCGGAGCGGAAGGCACT
AGGAAAATCGTAATTTCTGT

Product: virA/G regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASGKACATSEESCAGGPTLAPGH
SGP

Sequences:

>Translated_83_residues
MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASGKACATSEESCAGGPTLAPGH
SGP
>Mature_83_residues
MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASGKACATSEESCAGGPTLAPGH
SGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VIRE3_AGRT5 (P08061)

Other databases:

- EMBL:   M15814
- EMBL:   J03320
- EMBL:   AE007871
- PIR:   AB3251
- PIR:   S11843
- RefSeq:   NP_396508.2
- STRING:   P08061
- GeneID:   1137511
- GenomeReviews:   AE007871_GR
- KEGG:   atu:Atu6188
- NMPDR:   fig|176299.3.peg.5393
- ProtClustDB:   CLSK861988
- BioCyc:   ATUM176299-1:ATU6188-MONOMER
- GO:   GO:0009405

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9021; Mature: 9021

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASG
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCC
KACATSEESCAGGPTLAPGHSGP
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASG
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCC
KACATSEESCAGGPTLAPGHSGP
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3549694; 2194232; 11743193; 11743194