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The map label for this gene is ypdA [H]

Identifier: 57652321

GI number: 57652321

Start: 2660738

End: 2661844

Strand: Reverse

Name: ypdA [H]

Synonym: SACOL2600

Alternate gene names: 57652321

Gene position: 2661844-2660738 (Counterclockwise)

Preceding gene: 57652322

Following gene: 57652320

Centisome position: 94.75

GC content: 35.32

Gene sequence:

>1107_bases
ATGCAACATCATAAAGTGGCTATTATCGGTGCCGGTGCTGCAGGTATAGGTATGGCCATTACCTTAAAAGATTTCGGTAT
AACAGATGTCATTATTTTAGAAAAAGGAACAGTAGGACATTCATTTAAACATTGGCCGAAATCGACCCGTACGATCACGC
CATCATTTACGTCTAATGGATTTGGCATGCCTGATATGAATGCAATTTCCATGGATACTTCACCAGCATTTACATTTAAT
GAAGAACATATTTCCGGAGAAACATATGCTGAATATTTACAAGTGGTTGCCAACCATTACGAGCTGAATATCTTTGAAAA
TACAGTTGTCACAAATATATCTGTAGATGATGCATATTATACGATTGCAACGACAACAGAGATATATCACGCGGATTATA
TCTTTGTCGCAACAGGTGATTATAATTTCCCTAAAAAGCCATTTAAATATGGTATTCATTATAGTGAAATTGAAGACTTT
GATAACTTTAATAAGGGGCAATATGTGGTTATCGGAGGTAATGAAAGTGGCTTTGATGCTGCATATCAACTTGCAAAAAA
TGGCTCTGACATCGCACTTTATACTAGCACAACCGGTTTAAATGATCCGGATGCTGATCCTAGTGTTAGATTGTCACCTT
ATACACGTCAGCGACTAGGTAATGTCATTAAGCAAGGTGCTCGCATCGAAATGAATGTACATTATACAGTTAAAGATATT
GATTTTAACAATGGACAGTATCATATCAGTTTTGATAGCGGACAAAGTGTGCTTACACCTCATGAACCAATACTAGCAAC
TGGCTTTGATGCAACAAAAAATCCAATCGTTCAACAATTATTTGTGACAACAAATCAAGATATTAAATTAACAACACATG
ATGAATCGACACGTTATCCGAATATTTTTATGATTGGTGCAACAGTTGAAAATGATAATGCCAAATTATGCTATATCTAT
AAATTTAGAGCGCGATTTGCAGTACTTGCACATCTTTTAACACAGCGGGAAGGCTTACCAGCTAAACAAGATGTCATTGA
AAATTATCAAAAAAATCAAATGTATTTAGATGATTATTCATGTTGTGAAGTGTCATGCACATGTTAG

Upstream 100 bases:

>100_bases
TGAAATTTCTCAAGGATAGGTCTATACTTTATAAATCGTAACTATTACGATTTATAATCAAAAACAATAACTTGAAATAG
ATCATTGAGGGAGTGTTAAT

Downstream 100 bases:

>100_bases
AAGTGAAATATGATATGAGAACTGGGCATTATACGCCCATACCTAATGAACCTCATTATTTGGTTATTAGTCATGCGGAT
AAACTTACCGCAACAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN
EEHISGETYAEYLQVVANHYELNIFENTVVTNISVDDAYYTIATTTEIYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
DFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIY
KFRARFAVLAHLLTQREGLPAKQDVIENYQKNQMYLDDYSCCEVSCTC

Sequences:

>Translated_368_residues
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN
EEHISGETYAEYLQVVANHYELNIFENTVVTNISVDDAYYTIATTTEIYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
DFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIY
KFRARFAVLAHLLTQREGLPAKQDVIENYQKNQMYLDDYSCCEVSCTC
>Mature_368_residues
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN
EEHISGETYAEYLQVVANHYELNIFENTVVTNISVDDAYYTIATTTEIYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
DFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIY
KFRARFAVLAHLLTQREGLPAKQDVIENYQKNQMYLDDYSCCEVSCTC

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 41169; Mature: 41169

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNG
CCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHCCCCCCCEECCCCCCCC
FGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISVDDAYY
CCCCCCCEEEECCCCCEEECHHHCCCHHHHHHHHHHHCCEEEEEECCEEEEEEEECCEEE
TIATTTEIYHADYIFVATGDYNFPKKPFKYGIHYSEIEDFDNFNKGQYVVIGGNESGFDA
EEEEEEEEEECCEEEEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCHHH
AYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
HHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEE
DFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYP
ECCCCEEEEEECCCCEEECCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCCCCC
NIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQDVIENYQKNQMYLDDYS
EEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCC
CCEVSCTC
EEEEEECC
>Mature Secondary Structure
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNG
CCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHCCCCCCCEECCCCCCCC
FGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISVDDAYY
CCCCCCCEEEECCCCCEEECHHHCCCHHHHHHHHHHHCCEEEEEECCEEEEEEEECCEEE
TIATTTEIYHADYIFVATGDYNFPKKPFKYGIHYSEIEDFDNFNKGQYVVIGGNESGFDA
EEEEEEEEEECCEEEEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCHHH
AYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
HHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEE
DFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYP
ECCCCEEEEEECCCCEEECCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCCCCC
NIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQDVIENYQKNQMYLDDYS
EEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCC
CCEVSCTC
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]