Click here to switch to the map view.

The map label for this gene is ylmF

Identifier: 57651759

GI number: 57651759

Start: 1208280

End: 1208843

Strand: Direct

Name: ylmF

Synonym: SACOL1202

Alternate gene names: 57651759

Gene position: 1208280-1208843 (Clockwise)

Preceding gene: 57651758

Following gene: 57651760

Centisome position: 43.01

GC content: 34.93

Gene sequence:

>564_bases
GTGAGCCACTTGGCTTTAAAAGATTTATTTAGTGGATTTTTTGTAATAGATGATGAAGAGGAAGTAGAAGTACCTGACAA
ACAACAACAGGTAAATGAAGCGCCAGCAAAAGAGCAGTCACAACAAACAACAAAACAAAACGCAATCAAATCAGTCCCTC
AAAAATCTGCATCAAGATATACAACAACGTCAGAAGAAAGGAATAACCGTATGTCTAATTATTCAAAAAATAATTCACGT
AATGTTGTAACTATGAACAATGCTACACCAAACAATGCATCACAAGAAAGTTCAAAAATGTGTTTATTCGAACCACGTGT
TTTTTCAGATACACAAGATATTGCTGATGAGCTTAAAAACCGCCGTGCGACACTTGTCAATTTACAACGTATTGATAAAG
TATCAGCGAAAAGAATTATTGATTTTTTAAGCGGTACTGTTTATGCAATCGGTGGAGATATCCAACGTGTAGGTACTGAT
ATTTTCTTATGTACGCCTGATAATGTGGAAGTAGCTGGAAGCATTACAGACCATATTGAAAATATGGAACATTCATTCGA
CTAA

Upstream 100 bases:

>100_bases
GTGATGAATTATCAATGGGAATGAGTAATGACTATCTTATTGCAGTTGAAGAAGGTGCGACGTTTGTTAGAATTGGGACT
AAACTTGTAGGAGAAGAGGA

Downstream 100 bases:

>100_bases
GGAGTTAACATATGGATATAAATGTGCTAGCTACAATATTTAAATTCATCCTTTTTGTTGTTGAAATTTATTATTTCGGC
ATGATTATATATTTCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRYTTTSEERNNRMSNYSKNNSR
NVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTD
IFLCTPDNVEVAGSITDHIENMEHSFD

Sequences:

>Translated_187_residues
MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRYTTTSEERNNRMSNYSKNNSR
NVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTD
IFLCTPDNVEVAGSITDHIENMEHSFD
>Mature_186_residues
SHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRYTTTSEERNNRMSNYSKNNSRN
VVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDI
FLCTPDNVEVAGSITDHIENMEHSFD

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_STAA1 (A7X1D2)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001441769.1
- STRING:   A7X1D2
- EnsemblBacteria:   EBSTAT00000003336
- GeneID:   5561108
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1179
- eggNOG:   COG1799
- GeneTree:   EBGT00050000023797
- HOGENOM:   HBG700081
- OMA:   SENEVHE
- ProtClustDB:   CLSK885188
- BioCyc:   SAUR418127:SAHV_1179-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 21023; Mature: 20892

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
CCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
CCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHH
RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCEEEEECCCCCEEECHHHHHHH
NMEHSFD
HHHHCCC
>Mature Secondary Structure 
SHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
CCHHHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
CCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHH
RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCEEEEECCCCCEEECHHHHHHH
NMEHSFD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA