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The map label for this gene is ycjS [H]

Identifier: 57651213

GI number: 57651213

Start: 231072

End: 232112

Strand: Direct

Name: ycjS [H]

Synonym: SACOL0197

Alternate gene names: 57651213

Gene position: 231072-232112 (Clockwise)

Preceding gene: 57651212

Following gene: 57651214

Centisome position: 8.22

GC content: 39.39

Gene sequence:

>1041_bases
ATGACAAAATTAAAAGTTGGTGTGATAGGTGTTGGTGGTATTGCACAAGACCGTCATATTCCAGCATTGCTGAAACTCAA
AGACACAGTCTCATTAGTTGCAGTACAAGATATTAATACAGTGCAGATGATTGATGTTGCGAAGCGCTTTAATATACCTC
ATGCAGTTGAGACACCTAGCGAGCTGTTTAAACTTGTTGATGCGGTGGTCATTTGTACACCTAATAAATTCCATGCTGAT
CTTTCTATAGAAGCATTGAACCATGGTGTCCATGTATTGTGTGAAAAGCCAATGGCGATGACGACGGAAGAGTGTGATCG
CATGATTGAAGCGGCTAATAAAAATCACAAATTATTAACTGTCGCATATCATTATCGTCACACAGATGTGGCAATTACTG
CTAAAAAAGCAATTGAATCAGGTGTGGTTGGTAAACCTTTAGTAGCACGTGTACAAGCGATGCGTAGGCGTAAAGTGCCT
GGCTGGGGTGTTTTTACCAATAAAGCGTTGCAAGGTGGCGGTAGTTTAATCGATTATGGTTGCCACTTGTTAGACTTATC
TTTGTGGCTACTAGGTAAAGATATGGTGCCGCATGAAGTGCTAGGAAAAACATATAATCAATTGAGCAAACAACCGAATC
AAATTAATGATTGGGGAACATTTGATCATACTAAATTTGATGTCGATGATCATGTTACTAGTTATATGACATTTGCCAAT
CGAGCAAGCATGCAGTTTGAATGTTCGTGGTCTGCAAATATCAAAGAAGATAAGGTTCACGTTAGTTTATCAGGAGAAGA
TGGCGGTATCAATTTATTTCCATTTGAAATATATGAGCCCCGCTTTGGAACTATTTTTGAAAGCAAAGCTAATGTTGAGC
ATAACGAAGACATTGCTGGTGAGAGACAGGCGCGTAACTTTGTCAATGCGTGTTTAGGGATAGAAGAGATTGTGGTGAAA
CCGGAAGAAGCACGCAATGTAAATGCCCTTATAGAAGCGATTTATCGTAGCGATCTTGATAACAAGAGCATACAACTTTA
A

Upstream 100 bases:

>100_bases
AGCAATGGTAGTTACAAAAATTCTTGAAGCGATTTATCAGTCTGCAAAATCAGGCAAAGCAATTTACTTTGAATAACATC
ATACGGTAAGGAGGCACATC

Downstream 100 bases:

>100_bases
TGATTATCATATATGATACAAAATTCTCAATATAAAAAGAAGGAGTGCTTTTCAATGAAAATAGGTGTATTTTCAGTATT
ATTTTACGATAAAAATTTTG

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPSELFKLVDAVVICTPNKFHAD
LSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLTVAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVP
GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVK
PEEARNVNALIEAIYRSDLDNKSIQL

Sequences:

>Translated_346_residues
MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPSELFKLVDAVVICTPNKFHAD
LSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLTVAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVP
GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVK
PEEARNVNALIEAIYRSDLDNKSIQL
>Mature_345_residues
TKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPSELFKLVDAVVICTPNKFHADL
SIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLTVAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPG
WGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFANR
ASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVKP
EEARNVNALIEAIYRSDLDNKSIQL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=348, Percent_Identity=31.8965517241379, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1787307, Length=192, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323975, Length=206, Percent_Identity=28.6407766990291, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581117, Length=281, Percent_Identity=26.6903914590747, Blast_Score=78, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38558; Mature: 38426

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPS
CCEEEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHH
ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
HHHHHHHEEEEECCCCCCCCEEEEEHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
VAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
EEEEEEECCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHCCCCCHHHHH
CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHC
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
CCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCC
ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
HHHHHHHHHHHHCHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPHAVETPS
CEEEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCHH
ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
HHHHHHHEEEEECCCCCCCCEEEEEHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
VAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
EEEEEEECCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHCCCCCHHHHH
CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHC
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
CCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCC
ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
HHHHHHHHHHHHCHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]