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The map label for this gene is ycjS [H]

Identifier: 57651212

GI number: 57651212

Start: 229971

End: 231047

Strand: Direct

Name: ycjS [H]

Synonym: SACOL0196

Alternate gene names: 57651212

Gene position: 229971-231047 (Clockwise)

Preceding gene: 57651211

Following gene: 57651213

Centisome position: 8.19

GC content: 39.0

Gene sequence:

>1077_bases
ATGACGATTAAAGTTGGAATCATTGGGTGTGGTGGTATTGCGAATGGCAAGCACATGCCAAGTTTACAAAAAGTTGAAAA
TGTTGAAATGATCGCATTTTGTGACGTAGACATTTCGAAAGCAGCGAGTGCGGCAGAAGCATACGGAACTGACAATGCAA
AGGTTTATGATGATTACAAAGCATTGTTAAAAGATGACACGATTGATGTTATCCATGTTTGTACGCCAAATGACTCGCAT
TGTGAAATTACTGTAGCAGGGCTGCATGCTGGTAAACATGTGATGTGTGAAAAACCAATGGCTAAAACGACAGCAGAAGC
TCAAAAAATGATAGATACAGCTAAATCAACAGGTAAAAAATTAACAATAGGTTATCAAAATCGTTTCCGAGCAGATAGTC
AATTTTTACATCAAGCAGCGCAACGTGGCGACTTAGGAGACATTTACTTCGGAAAGGCACATGCCATTCGTCGTCGAGCA
GTACCAACATGGGGTGTCTTTCTAGACGAAGAAGCTCAAGGTGGAGGACCATTAATCGATATCGGTACACACGCTTTAGA
TTTAACGTTATGGATGATGGATAATTATGAACCAGAATCAGTGATGGGTTCAACATTCCATAAATTAAATAAACAGCATC
ATGCGGCAAACGCTTGGGGTTCATGGAATCCAGATGAATTTACAGTTGAAGATTCTGCGTTTGGATTTATTAAAATGAAG
AATGGAGCGACGATCATTTTAGAATCCGCTTGGGCGATTAATTCTTTAGAAGTGGATGAGGCAAAATGTTCATTATCAGG
AACTAAAGCAGGTGCTGATATGAAAGATGGTCTACGTATTCATGGTGAAGACATGGGTACACTTTATACCAAACACGTTG
AATTGGAAAACAAAGGCGTCGACTTTTATGAAGGTAATGAAGTGGATGAAGCTGAAGAAGAAGCAAAAGCTTGGATTGAT
GCAGTTGTAAATGATACTGAACCAGTTGTGAAACCGGAACAAGCAATGGTAGTTACAAAAATTCTTGAAGCGATTTATCA
GTCTGCAAAATCAGGCAAAGCAATTTACTTTGAATAA

Upstream 100 bases:

>100_bases
TTAACAACAGGTGCGACAAAAGGTTAGTTTGAAATTAGGAGTGGGGCAGAATTGATAAAGAACCACTAATGACGATAAAG
ATTAAAAGGAGGACGTTATG

Downstream 100 bases:

>100_bases
CATCATACGGTAAGGAGGCACATCATGACAAAATTAAAAGTTGGTGTGATAGGTGTTGGTGGTATTGCACAAGACCGTCA
TATTCCAGCATTGCTGAAAC

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSH
CEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRA
VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKMK
NGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWID
AVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE

Sequences:

>Translated_358_residues
MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSH
CEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRA
VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKMK
NGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWID
AVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
>Mature_357_residues
TIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSHC
EITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAV
PTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKMKN
GATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWIDA
VVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=208, Percent_Identity=29.8076923076923, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1787574, Length=357, Percent_Identity=36.9747899159664, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI87081947, Length=185, Percent_Identity=29.1891891891892, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789848, Length=195, Percent_Identity=30.2564102564103, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323975, Length=116, Percent_Identity=31.8965517241379, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581117, Length=172, Percent_Identity=25, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39181; Mature: 39049

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYK
CEEEEEEEECCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEHHHHH
ALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKK
HHHCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCE
LTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLDEEAQGGGPLID
EEEECCHHCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCCCEEEECCCCCCCCEEE
IGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKMK
ECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEC
NGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGV
CCCEEEEECCCCCCCEECCCHHEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCC
DFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
TIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYK
EEEEEEEECCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEHHHHH
ALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKK
HHHCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCE
LTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLDEEAQGGGPLID
EEEECCHHCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCCCEEEECCCCCCCCEEE
IGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKMK
ECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEC
NGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGV
CCCEEEEECCCCCCCEECCCHHEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCC
DFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]