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The map label for this gene is cap5F

Identifier: 57651158

GI number: 57651158

Start: 158416

End: 159525

Strand: Direct

Name: cap5F

Synonym: SACOL0141

Alternate gene names: NA

Gene position: 158416-159525 (Clockwise)

Preceding gene: 57651157

Following gene: 57651159

Centisome position: 5.64

GC content: 34.77

Gene sequence:

>1110_bases
TTGAATATTGTAATTACAGGAGCAAAAGGTTTTGTAGGAAAAAACTTGAAAGCAGATTTAACTTCAACGACAGATCATCA
TATTTTCGAAGTACATCGACAAACTAAAGAGGAAGAATTAGAGTCAGCATTGTTGAAAGCAGACTTTGTCGTGCATTTAG
CGGGTGTTAATCGACCTGAACATGACAAAGAATTCAGCTTAGGAAACGTGAGTTATTTAGATCATGTACTTGATATATTA
ACTAGAAATACGAAAAAGCCAGCGATATTATTATCGTCTTCAATACAAGCAACACAAGATAATCCTTATGGTGAGAGTAA
GTTGCAAGGGGAACAGCTATTAAGAGAGTATGCCGAAGAGTATGGCAATACGGTTTATATTTATCGCTGGCCAAATTTAT
TCGGCAAGTGGTGTAAGCCGAATTATAACTCAGTGATAGCAACATTTTGTTACAAAATTGCACGTAACGAAGAGATTCAA
GTTAATGATCGGAATGTTGAACTAACGCTAAACTACGTGGATGATATCGTCGCTGAAATAAAGCGTGCTATTGAAGGAAC
TCCAACGATTGAAAATGGTGTACCTACAGTACCAAACGTATTTAAAGTGACATTGGGAGAAATTGTAGATTTATTATACA
AGTTCAAACAGTCACGTCTCGATCGAACATTGCCGAAATTAGATAACTTGTTTGAAAAAGATTTGTATAGTACGTATTTA
AGCTATCTACCTAGTACAGACTTTAGTTATCCCTTACTTATGAATGTGGATGATAGGGGTTCTTTTACAGAATTTATAAA
AACACCGGATCGTGGTCAAGTTTCTGTAAATATTTCTAAACCAGGTATTACTAAAGGTAATCACTGGCATCATACTAAAA
ACGAAAAATTTCTAGTCGTATCAGGTAAAGGGGTAATTCGTTTTAGACATGTTAATGATGATGAAATCATTGAATATTAT
GTTTCTGGCGACAAATTAGAAGTTGTAGACATACCAGTAGGATACACACATAATATTGAAAATTTAGGCGACACAGATAT
GGTAACTATTATGTGGGTGAATGAAATGTTTGATCCAAATCAGCCAGATACGTATTTCTTGGAGGTATAG

Upstream 100 bases:

>100_bases
TTTAACGGTGGAAGAGATAAAAGAAAAACTTTTAACACTAGAATATGTTAGAAACGAATTGAATGATTATAAAGCTTCAA
TGAGATAGGAGAGATTGACG

Downstream 100 bases:

>100_bases
CGCATGGAAAAACTGAAATTAATGACAATAGTTGGTACAAGGCCTGAAATCATTCGTTTATCATCAACGATTAAAGCATG
TGATCAATATTTTAATCAGA

Product: capsular polysaccharide biosynthesis protein Cap5F

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis K; Capsular Polysaccharide Synthesis; Capsular Polysaccharide Synthesis CapF; Capsular Polysaccharide Biosynthesis F; Nucleoside-Diphosphate-Sugar Epimerase; UDP-2-Acetamido-2 6-Dideoxy-Beta-L-Talose 4-Dehydrogenase; NAD Dependent Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase WbjC; FnlB Protein Involved In UDP-L-FucpNAc Biosynthesis; Epimerase/Dehydratase; Capsular Polysaccharide Synthesis Cap5F; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFVVHLAGVNRPEHDKEFSLGNVSYLDHVLDIL
TRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ
VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYL
SYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYY
VSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV

Sequences:

>Translated_369_residues
MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFVVHLAGVNRPEHDKEFSLGNVSYLDHVLDIL
TRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ
VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYL
SYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYY
VSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV
>Mature_369_residues
MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFVVHLAGVNRPEHDKEFSLGNVSYLDHVLDIL
TRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ
VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYL
SYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYY
VSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42267; Mature: 42267

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFVVHLAGVNRPE
CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEE
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHH
YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEI
HCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEHHHHHHHHHHH
KRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYL
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVV
HHCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
SGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPN
ECCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHCCCC
QPDTYFLEV
CCCEEEEEC
>Mature Secondary Structure
MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFVVHLAGVNRPE
CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEE
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHH
YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEI
HCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEHHHHHHHHHHH
KRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYL
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVV
HHCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
SGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPN
ECCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHCCCC
QPDTYFLEV
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA