Click here to switch to the map view.

The map label for this gene is yycI

Identifier: 57651130

GI number: 57651130

Start: 28820

End: 29608

Strand: Direct

Name: yycI

Synonym: SACOL0022

Alternate gene names: NA

Gene position: 28820-29608 (Clockwise)

Preceding gene: 57651129

Following gene: 57651131

Centisome position: 1.03

GC content: 32.45

Gene sequence:

>789_bases
ATGAACTGGAAACTGACAAAGACACTTTTCATTTTCGTGTTTATTCTTGTCAACATCGTGTTAGTATCGATTTATGTTAA
TAAAGTCAATCGCTCACACATTAATGAAGTCGAGAGTAACAATGAAGTTAATTTTCAGCAAGAAGAAATTAAAGTACCGA
CTAGTATATTGAATAAATCAGTTAAAGGTATAAAATTAGAGCAAATTACAGGGCGATCAAAAGACTTTAGTTCTAAAGCT
AAAGGCGATTCGGATTTGACCACATCAGATGGTGGAAAATTATTGAATGCGAACATTAGTCAATCGGTAAAGGTCAGTGA
CAATAACTTAAAAGATTTGAAAGATTATGTTAACAAGCGCGTATTTAAAGGTGCTGAATATCAATTAAGCGAGATTAGTT
CAGATTCTGTAAAATATGAACAAACGTATGATGATTTTCCGATTTTAAATAACAGTAAAGCGATGTTGAACTTTAATATA
GAAGATAACAAAGCGACTAGTTATAAACAATCAATGATGGATGACATTAAGCCCACAGATGGTGCAGATAAGAAGCATCA
AGTGATTGGTGTGAGAAAAGCAATCGAGGCATTATATTATAATCGTTACTTGAAAAAAGGTGATGAAGTCATTAATGCTA
GACTCGGTTACTACTCAGTCGTGAATGAAACGAATGTTCAATTGTTACAACCAAACTGGGAAATTAAAGTGAAGCATGAC
GGTAAGGATAAAACGAATACTTACTATGTCGAAGCGACAAATAATAACCCTAAAATTATTAATCATTAA

Upstream 100 bases:

>100_bases
TAATCACATTGAAGTGCAGATTAACAGTGAACTCGTACCGCGTTGGTATGTAGAATATGATGGCGAATGGTATGTTTATA
ACGATGGGAGGCTTGAATAA

Downstream 100 bases:

>100_bases
TATGAATCGTAATAAGCTAGCATTGCAAGCTCATCATATGTGAGAAGCGGTGCTAGCTTTTTTGCTGGTACGGTTTATTA
TGGCTGATGTTTTTGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKSVKGIKLEQITGRSKDFSSKA
KGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNI
EDNKATSYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
GKDKTNTYYVEATNNNPKIINH

Sequences:

>Translated_262_residues
MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKSVKGIKLEQITGRSKDFSSKA
KGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNI
EDNKATSYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
GKDKTNTYYVEATNNNPKIINH
>Mature_262_residues
MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKSVKGIKLEQITGRSKDFSSKA
KGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNI
EDNKATSYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
GKDKTNTYYVEATNNNPKIINH

Specific function: Unknown

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29932; Mature: 29932

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHCCCHHHHCCC
VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHH
VFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNIEDNKATSYKQSMMDDIKPTD
HHCCCCHHHHHCCCCCEEECCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCCEEEECCCCEEEEEEC
GKDKTNTYYVEATNNNPKIINH
CCCCCCEEEEEEECCCCEECCC
>Mature Secondary Structure
MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHCCCHHHHCCC
VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHH
VFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNIEDNKATSYKQSMMDDIKPTD
HHCCCCHHHHHCCCCCEEECCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCCEEEECCCCEEEEEEC
GKDKTNTYYVEATNNNPKIINH
CCCCCCEEEEEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA