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The map label for this gene is efb

Identifier: 57650267

GI number: 57650267

Start: 1176734

End: 1177231

Strand: Direct

Name: efb

Synonym: SACOL1168

Alternate gene names: 57650267

Gene position: 1176734-1177231 (Clockwise)

Preceding gene: 57650266

Following gene: 57650268

Centisome position: 41.89

GC content: 31.12

Gene sequence:

>498_bases
ATGAAAAATAAATTGATAGCAAAATCTTTATTAACATTAGCGGCAATAGGTATTACTACAACTACAATTGCGTCAACAGC
AGATGCGAGCGAAGGATACGGTCCAAGAGAAAAGAAACCAGTGAGTATTAATCACAATATCGTAGAGTACAATGATGGTA
CTTTTAAATATCAATCTAGACCAAAATTTAACTCAACACCTAAATATATTAAATTCAAACATGACTATAATATTTTAGAA
TTTAACGATGGTACATTCGAATATGGTGCACGTCCACAATTTAATAAACCAGCAGCGAAAACTGATGCAACTATTAAAAA
AGAACAAAAATTGATTCAAGCTCAAAATCTTGTGAGAGAATTTGAAAAAACACATACTGTCAGTGCACACAGAAAAGCAC
AAAAGGCAGTCAACTTAGTTTCGTTTGAATACAAAGTGAAGAAAATGGTCTTACAAGAGCGAATTGATAATGTATTAAAA
CAAGGATTAGTTAAATAA

Upstream 100 bases:

>100_bases
TATAAAGTGTTTATAGTTAATTAATAATTAGTTAATTTCAAAAGTTGTATAAATAGGATAACTTAATAAATGTAAGATAA
TAATTTGGAGGATAATTAAC

Downstream 100 bases:

>100_bases
AACTTCAATCGTTGCTGTTATCTGGAAATAATTAATTAAATGTTATGTTAATTTTTGTTAATGAAAAAAGTAATCTATTT
AATGACAGGTTAATGTAATT

Product: fibrinogen-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILE
FNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLK
QGLVK

Sequences:

>Translated_165_residues
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILE
FNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLK
QGLVK
>Mature_165_residues
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILE
FNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLK
QGLVK

Specific function: Binds to host fibrinogen

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FIB_STAAC (Q5HGS6)

Other databases:

- EMBL:   CP000046
- RefSeq:   YP_186031.1
- ProteinModelPortal:   Q5HGS6
- SMR:   Q5HGS6
- STRING:   Q5HGS6
- EnsemblBacteria:   EBSTAT00000008674
- GeneID:   3238454
- GenomeReviews:   CP000046_GR
- KEGG:   sac:SACOL1168
- TIGR:   SACOL1168
- GeneTree:   EBGT00070000032072
- HOGENOM:   HBG215821
- OMA:   KMILQER
- ProtClustDB:   CLSK885166
- BioCyc:   SAUR93062:SACOL1168-MONOMER
- InterPro:   IPR021033

Pfam domain/function: PF12199 efb-c

EC number: NA

Molecular weight: Translated: 18765; Mature: 18765

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEECCCEEEECCC
PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEECCCEEEECCC
PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA