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The map label for this gene is rpmH

Identifier: 41410448

GI number: 41410448

Start: 4829033

End: 4829176

Strand: Reverse

Name: rpmH

Synonym: MAP4350c

Alternate gene names: 41410448

Gene position: 4829176-4829033 (Counterclockwise)

Preceding gene: NA

Following gene: 41410447

Centisome position: 99.99

GC content: 73.61

Gene sequence:

>144_bases
GTGGCCAAGGGCAAGCGGACCTTCCAGCCGAATAACCGGCGCCGAGCCCGCGTGCATGGCTTCCGGTTGCGGATGCGCAC
GCGCGCCGGGCGCGCGATCGTGTCCGGTCGGCGCCGCAAGGGTCGCCGCGCGCTCTCTGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGGCCAGGAGCAGCAAGACCACCCTCCGGTCGAACCGCAGACGAGCCCGAAGCGAACCGTCTGAGCGGCCGGACGG
CAAACAACGAGGAGAACGTC

Downstream 100 bases:

>100_bases
TCGCACGTCAGGTCTTTCGCGGTGCTTCCCGCACGCAACCGCATGACGAGGTCAACCGAGTTTGACGCGACGGTGAAGCA
CGGAACCCGCATGGCGCAGC

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA

Sequences:

>Translated_47_residues
MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA
>Mature_46_residues
AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_MYCA1 (A0QND5)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_884423.1
- ProteinModelPortal:   A0QND5
- SMR:   A0QND5
- STRING:   A0QND5
- EnsemblBacteria:   EBMYCT00000013788
- GeneID:   4529876
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_5313
- TIGR:   MAV_5313
- eggNOG:   COG0230
- GeneTree:   EBGT00050000017102
- HOGENOM:   HBG729750
- ProtClustDB:   PRK00399
- BioCyc:   MAVI243243:MAV_5313-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5519; Mature: 5387

Theoretical pI: Translated: 13.65; Mature: 13.65

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA
CCCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA
CCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA