Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410422

Identifier: 41410422

GI number: 41410422

Start: 4798785

End: 4799651

Strand: Reverse

Name: 41410422

Synonym: MAP4324c

Alternate gene names: NA

Gene position: 4799651-4798785 (Counterclockwise)

Preceding gene: 41410423

Following gene: 41410421

Centisome position: 99.38

GC content: 74.05

Gene sequence:

>867_bases
GTGGGGAAGCCGGTGACCGATCCCCTGAGAATGCAAGCGGTCGCGGCGTTGTCGCGCGGCCACGAACTGTTCGCCGGCGC
CCCTACCCGCGACCGCCTCGGTGCCCCGACGGCCCGGCCCCGCACCACGTCACCGTCCACGCTGCCGGCCGCCGTTGTCG
CCCGGTCGGGTGCCTTGGCGCAACGGCTGGCGCAGTCGGACGACGCCGACCGGGTGCTGCGGACCGTGTTGGCGGCGGCG
CGGGCCGATCACGCGCACGGCCGCGCGGCGACGGGCACGGTGCTGGACGCCGCGCTGGCCGACGCGGCACCGGCCGCCGA
TACCCCGCTGGGCCGGCGCGAGGCCATGGCCCGCATGGCGGCGCGGCTGCGCACCCAGCATCGGCACATCAGCCGCTCGC
GGCGGCGCGCGCGGCTGCTCGCGCTGCGGCTGCGACGCCTGCACTACCGCCGCCGCCGTCCGGCCGCCGGGCCCACCAAC
CAGCCCGGCGGACGCCCCGCGGTGCTGGCCGCCATCCGTAAAGCCTTGGATATCAAGGGCATTCACGACCCGGCGGCGCG
GGCCCGCTGGGAGCGCGGCATGGACCTGGTGGCCCGTCGCGAATCGAACTACAACGCCGGCGCGGTCAACGACTGGGATG
CCAACGCCGCGCGGGGCACCCCCAGCAAGGGCGCCTGGCAATTCATCGAACCCACCTTCGCCGCCTATCACCAGCGCGGC
ACCTCGCGCGACATCCACAACCTGGTCGCGCAGGCGTGCGCGTTCATCAACTATGCGATGGGCCGTTACGGGGTTGCCGC
CGACGCGTCGAATCTCGCCGATCGGATTCAGCAGGCCGATCCTCGCCGATCACCCAAGGGGTACTGA

Upstream 100 bases:

>100_bases
ATTGGTAGGTCTGCGGCGTTCGCGGCCAGGAGGGTGTGGGAGTACTAGCTCGAGTGTCCGGTAAGGATGCGGCGCCGCCA
CGGCGCGCAGGTGGATCGGG

Downstream 100 bases:

>100_bases
CGATGCCGCTGAGTTTGTCTAACCGCGACCAGAACTCCGGGCACCTGTTCTACAACCGGCGGCTGCGGGCGGCGACCACC
CGCTTCTCGGTGCGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGKPVTDPLRMQAVAALSRGHELFAGAPTRDRLGAPTARPRTTSPSTLPAAVVARSGALAQRLAQSDDADRVLRTVLAAA
RADHAHGRAATGTVLDAALADAAPAADTPLGRREAMARMAARLRTQHRHISRSRRRARLLALRLRRLHYRRRRPAAGPTN
QPGGRPAVLAAIRKALDIKGIHDPAARARWERGMDLVARRESNYNAGAVNDWDANAARGTPSKGAWQFIEPTFAAYHQRG
TSRDIHNLVAQACAFINYAMGRYGVAADASNLADRIQQADPRRSPKGY

Sequences:

>Translated_288_residues
MGKPVTDPLRMQAVAALSRGHELFAGAPTRDRLGAPTARPRTTSPSTLPAAVVARSGALAQRLAQSDDADRVLRTVLAAA
RADHAHGRAATGTVLDAALADAAPAADTPLGRREAMARMAARLRTQHRHISRSRRRARLLALRLRRLHYRRRRPAAGPTN
QPGGRPAVLAAIRKALDIKGIHDPAARARWERGMDLVARRESNYNAGAVNDWDANAARGTPSKGAWQFIEPTFAAYHQRG
TSRDIHNLVAQACAFINYAMGRYGVAADASNLADRIQQADPRRSPKGY
>Mature_287_residues
GKPVTDPLRMQAVAALSRGHELFAGAPTRDRLGAPTARPRTTSPSTLPAAVVARSGALAQRLAQSDDADRVLRTVLAAAR
ADHAHGRAATGTVLDAALADAAPAADTPLGRREAMARMAARLRTQHRHISRSRRRARLLALRLRRLHYRRRRPAAGPTNQ
PGGRPAVLAAIRKALDIKGIHDPAARARWERGMDLVARRESNYNAGAVNDWDANAARGTPSKGAWQFIEPTFAAYHQRGT
SRDIHNLVAQACAFINYAMGRYGVAADASNLADRIQQADPRRSPKGY

Specific function: Unknown

COG id: COG3953

COG function: function code R; SLT domain proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31178; Mature: 31047

Theoretical pI: Translated: 12.14; Mature: 12.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPVTDPLRMQAVAALSRGHELFAGAPTRDRLGAPTARPRTTSPSTLPAAVVARSGALA
CCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QRLAQSDDADRVLRTVLAAARADHAHGRAATGTVLDAALADAAPAADTPLGRREAMARMA
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ARLRTQHRHISRSRRRARLLALRLRRLHYRRRRPAAGPTNQPGGRPAVLAAIRKALDIKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
IHDPAARARWERGMDLVARRESNYNAGAVNDWDANAARGTPSKGAWQFIEPTFAAYHQRG
CCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
TSRDIHNLVAQACAFINYAMGRYGVAADASNLADRIQQADPRRSPKGY
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GKPVTDPLRMQAVAALSRGHELFAGAPTRDRLGAPTARPRTTSPSTLPAAVVARSGALA
CCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QRLAQSDDADRVLRTVLAAARADHAHGRAATGTVLDAALADAAPAADTPLGRREAMARMA
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ARLRTQHRHISRSRRRARLLALRLRRLHYRRRRPAAGPTNQPGGRPAVLAAIRKALDIKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
IHDPAARARWERGMDLVARRESNYNAGAVNDWDANAARGTPSKGAWQFIEPTFAAYHQRG
CCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
TSRDIHNLVAQACAFINYAMGRYGVAADASNLADRIQQADPRRSPKGY
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA