| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is mmpL4 [H]
Identifier: 41410418
GI number: 41410418
Start: 4790235
End: 4793093
Strand: Direct
Name: mmpL4 [H]
Synonym: MAP4320
Alternate gene names: 41410418
Gene position: 4790235-4793093 (Clockwise)
Preceding gene: 41410417
Following gene: 41410431
Centisome position: 99.18
GC content: 71.07
Gene sequence:
>2859_bases TTGCCTGACCGGCCGGGCATCCTCGGGCGGCTGACCGGCCGGTACGCGCTGCTGGTGGTGGGGCTGTGGGTGCTGGCCGC GGCCGTCGCCAATGTGGCTGTGCCGCAACTGGAACGGGTGGTCGACAGCCACGCCCGGTCCTTCATGCCGCCGAGCGCCC CGAGCGCGGTGGCCGCCGCCCGGGCCGCCCAGTTGTTCGACCAGACGCCGAGCAACAACTTCGTTTACGTTGTGCTGGAA CGCAATCAGCGGCTGGGCGCCGGCGATCGGCAGTTCTACGACGCGTTGACGGCGGCGCTGGGCTCCGACCACCGGCACGT GTACGCGGTGACCGACCTGTGGTCACAGCCCGCCACCGCGGCCGGCGCCCAGAGCACCGACGGCCAGGCCGTCAGCGTGA TGGTCCGGCTGGCCGGCATGCTCGGCACCGCCCAGGCCCGTGATTCGGTGAACGCGGTGCGCGCCACCGCCCAGAAGCTC GGCCCGCCGGCCGGCCTGCAGGTCCATGTCACGGGCCCCGGCGCCACCATCGTCGACAAATTCTCCGCGATCGACCGGCA GATGCTGGGGATCACCGCCGCCACCATCGGCCTGATCCTGCTGTTGCTGCTGGTGGTGTACCGGTCGCCGGTCGCCGCGG CGATCCCGCTGATCTCGGTGGGGCTCGCCTTCGCGCTGGCCCGCGCCGTCGTCGCCGCCCTCGGGCAGGCCAATGTAATT GAGGTGTCGCTGTTTTCGGTTGCGCTGATGGCCGCCATGACACTGGGCGCCGGCACCGATTACGCGATCTTCCTGGTGGG CCGCTACCACGAAGCGCGGCGCGGCGGCGTCGCGCCGGCCCAGGCGCTGACCGTGGCCTACCGTTCCATCGCGCCCGTGG TGATCGGGTCGGCGCTGACCGTGTCGGTGGCATTGGCCTGCCTGGTTTTCGCCCACGTGGGATCGTTCCGAAGCGCCGGA TTACCTTGCGCCATCGGCATTCTGGCCACCATGGTGGCGGCGCTGACGTTGACGCCCGCGCTGATGAGCCTGGCGGTGCG GCGCGGATACCTGGAACCGCGGCCGTCGCGCACCGCGCGGCGCTGGCGCCGGGTGGGCACCACCGTGGCGCGCTGGCCCG GTCCGATCCTGGTCGCCGCGTTGGGGTTGACCCTGCTGGTCGCCCTGCCGCTGGCCGGCATGCGGATCGGCTTCAACGAG CCCGCCGCCACGCCGTCGTCCACCGACTCCAACCGCGGATACGCAAGCGCCGGCCGGCATTTCCCGGAGAACGCGTTGCT GCCCGACGTCATCGCCATTCGGGCCGACCACGACCTGCGCAACCCGGCGGGCTTGATCGCCATCGAACGGATCACGCGGC ACATCATGGCCGTTCCCGGCGTGCGTGCCGTGCAATCCGCCAGCCGCCCGGACGGCAAGGTGCCCGAACAGGCGACGTTG AGCTATCAGGCCGGGGTGCTGGGCCGCCAGTTCGGCGACACCGTGGATTCGCTGACCCAGCGCCTGGCGCGGGTCTCCGA GCTGGACGGCGCGCTGGCGCAGACCCAGCACGCGGTGGATGGCCTCGGCAACGGATTGCGCGGCGGCAGCGCGGGTTTGG CCGACATGTCGGGCGCGGCCGACGACATGCGGGCCGGGATGGACGGCCTGCAGCGCAACGTCACCACGGTGTCGGGCTAC CTCGACCCGCTGCGCGACTTCGTCGGGCGGACCCCCGACTGCGCCGCCAACCCGATCTGCTCGACGGTGGACCGGGTGCT GGCGCCGGTCGACAGCCTGGTGCAGACGTCGGCGCAACTCGGCTCCGGAGCCGCCAAGCTGACCACCGGCTCCAACACCG CCGCCACCGCGATGGCCGGGCTGCCGCAGAACGTCGACGCGATGAAAAGCGCCCTGGTGCAGGCGCGTTCGGCGACGCGC GATCTGCTGGGACTGTCCGACACGCTGGGGCCGCAGATGCACCAGCTGACCGACTACCTCAACGAGATCAGCACCCAGTT CCAGGGCAGTGCCGCCGCGGATTTCTACCTGCCGCAGCGCGCGCTCACCGATCCGCGCTACACCGCCGTGCTGAACCACC TGATCTCGCAAAACGGCCGCGCCGCTTACCTGTTGGTGTACGGCGACGGCGCGGAGTGGGGCGCCGACGGTGCCGGGCGG GCCGAGCAGGTGCGCGCGGCCATCAAGGAGGCCACCAAGGAAGGCACCCTGACCCCCGTGGAGGTCGACCTCGCCGGGGT CGGCCCGGTCACCGCCGACCTGCAGCGCTTCGTGGCCGACGACACCCGGCTGCTGGTGGGCGCCGCGCTGGTGCTGATCT TCCTGATCGTCACCGCGATGCTGCGCAGCCCCGTGGCGGGCCTGGTGGTGGTCGGGACCGTCGTCACGTCATACGCCTCG GCGATCGGTGCCAGCGTGCTGATCTGGCAGCACCTGCTGCATCAGGAGCTGCACTGGGCGGTCGCCCCGATCGCGTTCAT CGCGTTGATCGCCATCGGCGCGGACTACAACCTGCTGCTGGCGTTGCGCATCAAACAGGAAGCGGCGGCGGGACTTCGGA CCGGGATCATCCGCGCCTTCGGCGGCACCGGCGGGGTGGTCACCGTCGCCGGCATCATCTTCGGGCTGACCATGCTGGCG CTGCTGACCAGCAGCGTGCTCAGCATCGCCCAGATCGGCACCACCATCGCCGTCGATCTGCTGCTGGACACTCTGGTGGT GCGGGCGTTCATCGTGCCGTCCATCGTGGCGCTGTTGGGCCGCTGGTTCTGGTGGCCCAGTCCCCTGCCCCGCCGCGGCG TCGCCCGCGTCGTGAAAACGGTTGAGCCGCAACCGCTCAGCGTCGCTACTGCGGTGTGA
Upstream 100 bases:
>100_bases ACCATCGGCGCGCGTCGCTCGCTGCGGATGCGGTCGATGGCGCGCGGTGAGCACGTCGCCGTCAGCCTGTTCGGCGGGCC CTCGGGCGATCGGCAGACCG
Downstream 100 bases:
>100_bases TGACCGTGGACGGCAGCCCGACCAGCACGCCCTCGACGTCGCCGTCGGCGCTGAGCAGCAGGCCACGTCCCGGCGGCAGC GCCTGGGCGCGGACGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 952; Mature: 951
Protein sequence:
>952_residues MPDRPGILGRLTGRYALLVVGLWVLAAAVANVAVPQLERVVDSHARSFMPPSAPSAVAAARAAQLFDQTPSNNFVYVVLE RNQRLGAGDRQFYDALTAALGSDHRHVYAVTDLWSQPATAAGAQSTDGQAVSVMVRLAGMLGTAQARDSVNAVRATAQKL GPPAGLQVHVTGPGATIVDKFSAIDRQMLGITAATIGLILLLLLVVYRSPVAAAIPLISVGLAFALARAVVAALGQANVI EVSLFSVALMAAMTLGAGTDYAIFLVGRYHEARRGGVAPAQALTVAYRSIAPVVIGSALTVSVALACLVFAHVGSFRSAG LPCAIGILATMVAALTLTPALMSLAVRRGYLEPRPSRTARRWRRVGTTVARWPGPILVAALGLTLLVALPLAGMRIGFNE PAATPSSTDSNRGYASAGRHFPENALLPDVIAIRADHDLRNPAGLIAIERITRHIMAVPGVRAVQSASRPDGKVPEQATL SYQAGVLGRQFGDTVDSLTQRLARVSELDGALAQTQHAVDGLGNGLRGGSAGLADMSGAADDMRAGMDGLQRNVTTVSGY LDPLRDFVGRTPDCAANPICSTVDRVLAPVDSLVQTSAQLGSGAAKLTTGSNTAATAMAGLPQNVDAMKSALVQARSATR DLLGLSDTLGPQMHQLTDYLNEISTQFQGSAAADFYLPQRALTDPRYTAVLNHLISQNGRAAYLLVYGDGAEWGADGAGR AEQVRAAIKEATKEGTLTPVEVDLAGVGPVTADLQRFVADDTRLLVGAALVLIFLIVTAMLRSPVAGLVVVGTVVTSYAS AIGASVLIWQHLLHQELHWAVAPIAFIALIAIGADYNLLLALRIKQEAAAGLRTGIIRAFGGTGGVVTVAGIIFGLTMLA LLTSSVLSIAQIGTTIAVDLLLDTLVVRAFIVPSIVALLGRWFWWPSPLPRRGVARVVKTVEPQPLSVATAV
Sequences:
>Translated_952_residues MPDRPGILGRLTGRYALLVVGLWVLAAAVANVAVPQLERVVDSHARSFMPPSAPSAVAAARAAQLFDQTPSNNFVYVVLE RNQRLGAGDRQFYDALTAALGSDHRHVYAVTDLWSQPATAAGAQSTDGQAVSVMVRLAGMLGTAQARDSVNAVRATAQKL GPPAGLQVHVTGPGATIVDKFSAIDRQMLGITAATIGLILLLLLVVYRSPVAAAIPLISVGLAFALARAVVAALGQANVI EVSLFSVALMAAMTLGAGTDYAIFLVGRYHEARRGGVAPAQALTVAYRSIAPVVIGSALTVSVALACLVFAHVGSFRSAG LPCAIGILATMVAALTLTPALMSLAVRRGYLEPRPSRTARRWRRVGTTVARWPGPILVAALGLTLLVALPLAGMRIGFNE PAATPSSTDSNRGYASAGRHFPENALLPDVIAIRADHDLRNPAGLIAIERITRHIMAVPGVRAVQSASRPDGKVPEQATL SYQAGVLGRQFGDTVDSLTQRLARVSELDGALAQTQHAVDGLGNGLRGGSAGLADMSGAADDMRAGMDGLQRNVTTVSGY LDPLRDFVGRTPDCAANPICSTVDRVLAPVDSLVQTSAQLGSGAAKLTTGSNTAATAMAGLPQNVDAMKSALVQARSATR DLLGLSDTLGPQMHQLTDYLNEISTQFQGSAAADFYLPQRALTDPRYTAVLNHLISQNGRAAYLLVYGDGAEWGADGAGR AEQVRAAIKEATKEGTLTPVEVDLAGVGPVTADLQRFVADDTRLLVGAALVLIFLIVTAMLRSPVAGLVVVGTVVTSYAS AIGASVLIWQHLLHQELHWAVAPIAFIALIAIGADYNLLLALRIKQEAAAGLRTGIIRAFGGTGGVVTVAGIIFGLTMLA LLTSSVLSIAQIGTTIAVDLLLDTLVVRAFIVPSIVALLGRWFWWPSPLPRRGVARVVKTVEPQPLSVATAV >Mature_951_residues PDRPGILGRLTGRYALLVVGLWVLAAAVANVAVPQLERVVDSHARSFMPPSAPSAVAAARAAQLFDQTPSNNFVYVVLER NQRLGAGDRQFYDALTAALGSDHRHVYAVTDLWSQPATAAGAQSTDGQAVSVMVRLAGMLGTAQARDSVNAVRATAQKLG PPAGLQVHVTGPGATIVDKFSAIDRQMLGITAATIGLILLLLLVVYRSPVAAAIPLISVGLAFALARAVVAALGQANVIE VSLFSVALMAAMTLGAGTDYAIFLVGRYHEARRGGVAPAQALTVAYRSIAPVVIGSALTVSVALACLVFAHVGSFRSAGL PCAIGILATMVAALTLTPALMSLAVRRGYLEPRPSRTARRWRRVGTTVARWPGPILVAALGLTLLVALPLAGMRIGFNEP AATPSSTDSNRGYASAGRHFPENALLPDVIAIRADHDLRNPAGLIAIERITRHIMAVPGVRAVQSASRPDGKVPEQATLS YQAGVLGRQFGDTVDSLTQRLARVSELDGALAQTQHAVDGLGNGLRGGSAGLADMSGAADDMRAGMDGLQRNVTTVSGYL DPLRDFVGRTPDCAANPICSTVDRVLAPVDSLVQTSAQLGSGAAKLTTGSNTAATAMAGLPQNVDAMKSALVQARSATRD LLGLSDTLGPQMHQLTDYLNEISTQFQGSAAADFYLPQRALTDPRYTAVLNHLISQNGRAAYLLVYGDGAEWGADGAGRA EQVRAAIKEATKEGTLTPVEVDLAGVGPVTADLQRFVADDTRLLVGAALVLIFLIVTAMLRSPVAGLVVVGTVVTSYASA IGASVLIWQHLLHQELHWAVAPIAFIALIAIGADYNLLLALRIKQEAAAGLRTGIIRAFGGTGGVVTVAGIIFGLTMLAL LTSSVLSIAQIGTTIAVDLLLDTLVVRAFIVPSIVALLGRWFWWPSPLPRRGVARVVKTVEPQPLSVATAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 99195; Mature: 99064
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRPGILGRLTGRYALLVVGLWVLAAAVANVAVPQLERVVDSHARSFMPPSAPSAVAAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RAAQLFDQTPSNNFVYVVLERNQRLGAGDRQFYDALTAALGSDHRHVYAVTDLWSQPATA HHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCC AGAQSTDGQAVSVMVRLAGMLGTAQARDSVNAVRATAQKLGPPAGLQVHVTGPGATIVDK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHH FSAIDRQMLGITAATIGLILLLLLVVYRSPVAAAIPLISVGLAFALARAVVAALGQANVI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE EVSLFSVALMAAMTLGAGTDYAIFLVGRYHEARRGGVAPAQALTVAYRSIAPVVIGSALT HHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VSVALACLVFAHVGSFRSAGLPCAIGILATMVAALTLTPALMSLAVRRGYLEPRPSRTAR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RWRRVGTTVARWPGPILVAALGLTLLVALPLAGMRIGFNEPAATPSSTDSNRGYASAGRH HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHCCCC FPENALLPDVIAIRADHDLRNPAGLIAIERITRHIMAVPGVRAVQSASRPDGKVPEQATL CCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHH SYQAGVLGRQFGDTVDSLTQRLARVSELDGALAQTQHAVDGLGNGLRGGSAGLADMSGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH DDMRAGMDGLQRNVTTVSGYLDPLRDFVGRTPDCAANPICSTVDRVLAPVDSLVQTSAQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GSGAAKLTTGSNTAATAMAGLPQNVDAMKSALVQARSATRDLLGLSDTLGPQMHQLTDYL CCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH NEISTQFQGSAAADFYLPQRALTDPRYTAVLNHLISQNGRAAYLLVYGDGAEWGADGAGR HHHHHHHCCCCCHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCH AEQVRAAIKEATKEGTLTPVEVDLAGVGPVTADLQRFVADDTRLLVGAALVLIFLIVTAM HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LRSPVAGLVVVGTVVTSYASAIGASVLIWQHLLHQELHWAVAPIAFIALIAIGADYNLLL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ALRIKQEAAAGLRTGIIRAFGGTGGVVTVAGIIFGLTMLALLTSSVLSIAQIGTTIAVDL EEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDTLVVRAFIVPSIVALLGRWFWWPSPLPRRGVARVVKTVEPQPLSVATAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHCCC >Mature Secondary Structure PDRPGILGRLTGRYALLVVGLWVLAAAVANVAVPQLERVVDSHARSFMPPSAPSAVAAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RAAQLFDQTPSNNFVYVVLERNQRLGAGDRQFYDALTAALGSDHRHVYAVTDLWSQPATA HHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCC AGAQSTDGQAVSVMVRLAGMLGTAQARDSVNAVRATAQKLGPPAGLQVHVTGPGATIVDK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHH FSAIDRQMLGITAATIGLILLLLLVVYRSPVAAAIPLISVGLAFALARAVVAALGQANVI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE EVSLFSVALMAAMTLGAGTDYAIFLVGRYHEARRGGVAPAQALTVAYRSIAPVVIGSALT HHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VSVALACLVFAHVGSFRSAGLPCAIGILATMVAALTLTPALMSLAVRRGYLEPRPSRTAR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RWRRVGTTVARWPGPILVAALGLTLLVALPLAGMRIGFNEPAATPSSTDSNRGYASAGRH HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHCCCC FPENALLPDVIAIRADHDLRNPAGLIAIERITRHIMAVPGVRAVQSASRPDGKVPEQATL CCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHH SYQAGVLGRQFGDTVDSLTQRLARVSELDGALAQTQHAVDGLGNGLRGGSAGLADMSGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH DDMRAGMDGLQRNVTTVSGYLDPLRDFVGRTPDCAANPICSTVDRVLAPVDSLVQTSAQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GSGAAKLTTGSNTAATAMAGLPQNVDAMKSALVQARSATRDLLGLSDTLGPQMHQLTDYL CCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH NEISTQFQGSAAADFYLPQRALTDPRYTAVLNHLISQNGRAAYLLVYGDGAEWGADGAGR HHHHHHHCCCCCHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCH AEQVRAAIKEATKEGTLTPVEVDLAGVGPVTADLQRFVADDTRLLVGAALVLIFLIVTAM HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LRSPVAGLVVVGTVVTSYASAIGASVLIWQHLLHQELHWAVAPIAFIALIAIGADYNLLL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ALRIKQEAAAGLRTGIIRAFGGTGGVVTVAGIIFGLTMLALLTSSVLSIAQIGTTIAVDL EEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDTLVVRAFIVPSIVALLGRWFWWPSPLPRRGVARVVKTVEPQPLSVATAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]