| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410405
Identifier: 41410405
GI number: 41410405
Start: 4777074
End: 4778141
Strand: Direct
Name: 41410405
Synonym: MAP4307
Alternate gene names: NA
Gene position: 4777074-4778141 (Clockwise)
Preceding gene: 41410404
Following gene: 41410407
Centisome position: 98.91
GC content: 71.54
Gene sequence:
>1068_bases GTGGACGACGATTGCCTGAAACTCACCACCTACCTGGCCGAGCGGAGACGGGCCGGGAACCGCTTCGTCTCCGACGTCCT GCTAGACCTGTACGCCCGCCACCGGGTGGAGTGCGCGGTGCTGCTCCGCGGCATCGGCGGGTTCGGCACCGGACACCGGC TGCGCAGCGACGAGTCCCTCACCCTGTCGGAGGATCCCCCGGTAGCCATCGTCGCGACCGACACCAGGACCAAGATCGAG GCGCTGCTCGATGAGGTGCTGGCCGTCAAACAACGCGGCCTGGTCACCTTGGAGCGGGCCCGGCTGCTGCACGCCGACGT CGGCGCGGCGCGGCCGCCCGAGGGTGACGCCGTCAAGTTGACCGTCTACCTCGGCCGCAAGCAGCGCGTCAACGGGACGC CGGCCTACATCGGGGTCTGCGATCTGCTGCACCGACGCGGCCTGGCCGGCGCCACGGTGCTGCTGGGCGTCGACGGTGTC GTGCACGGAGAACGCCGCCGCGCCAGCTTCTTCGGCCGCAACGTCGACGTGCCGATGATGATCGTGGTAGTCGGATCCGG CGCGCACATCGGGCGGGTGCTGCCCGAGATCGCCGCGCTGCTGCGCCGGCCGCTGTTCACGCTGGAACGGGTCCGGGTAT GCAAGCGCGACGGCCAATTGCTGGAGCCGCCGCACGCCCTGCCCGGCGTCGACGAGCGCGGGCTGCCGCTGTTCCAGCAG CTGACCGTGTACACCTCCGAATCCGCGCGGCACGGCGGCGTGCCGATTCACCGCGCGATCGTGGCGCGGCTGCGTCAGGC GACGGCGGCCGACGGCGCCACCGTGCTGCGCGGCGTCTGGGGTTTTCACGGCGACCACCCGCCGCACGGGGACGGGTTGT TCGCGCTGACCCGACGGGTGCCCGTGGTCACCATCGTCATCGACACGCCGGCCCACATCGCCGAATCCTTCGCCGTCATC GACGAATTGACCGGCGCCGAGGGCCTGGTCACCAGCGAGATGGTGCCCGCGCTGGTGTCCGACGACGGCGGACCCGGCGC CGGGCGGATGGCCCGGCACCGCTACTAA
Upstream 100 bases:
>100_bases ACCGGGCTGGACGCCGGTGCGGTGCGTGAGCGGGTGCGCACCTATCAGGACCGCTACGGGGTACCCACCGAGGCGTTGCG CTGAGGCGACGGGAGCTGCG
Downstream 100 bases:
>100_bases CTCAGCCGGCGACCGAGGCGTCGTAAATCGACTGGATCGCCTTGTCCAGCGTCGCGTTGAACTGCTCGTCGGACTGGTCG ACCGTGAGGCCCTCGGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDDDCLKLTTYLAERRRAGNRFVSDVLLDLYARHRVECAVLLRGIGGFGTGHRLRSDESLTLSEDPPVAIVATDTRTKIE ALLDEVLAVKQRGLVTLERARLLHADVGAARPPEGDAVKLTVYLGRKQRVNGTPAYIGVCDLLHRRGLAGATVLLGVDGV VHGERRRASFFGRNVDVPMMIVVVGSGAHIGRVLPEIAALLRRPLFTLERVRVCKRDGQLLEPPHALPGVDERGLPLFQQ LTVYTSESARHGGVPIHRAIVARLRQATAADGATVLRGVWGFHGDHPPHGDGLFALTRRVPVVTIVIDTPAHIAESFAVI DELTGAEGLVTSEMVPALVSDDGGPGAGRMARHRY
Sequences:
>Translated_355_residues MDDDCLKLTTYLAERRRAGNRFVSDVLLDLYARHRVECAVLLRGIGGFGTGHRLRSDESLTLSEDPPVAIVATDTRTKIE ALLDEVLAVKQRGLVTLERARLLHADVGAARPPEGDAVKLTVYLGRKQRVNGTPAYIGVCDLLHRRGLAGATVLLGVDGV VHGERRRASFFGRNVDVPMMIVVVGSGAHIGRVLPEIAALLRRPLFTLERVRVCKRDGQLLEPPHALPGVDERGLPLFQQ LTVYTSESARHGGVPIHRAIVARLRQATAADGATVLRGVWGFHGDHPPHGDGLFALTRRVPVVTIVIDTPAHIAESFAVI DELTGAEGLVTSEMVPALVSDDGGPGAGRMARHRY >Mature_355_residues MDDDCLKLTTYLAERRRAGNRFVSDVLLDLYARHRVECAVLLRGIGGFGTGHRLRSDESLTLSEDPPVAIVATDTRTKIE ALLDEVLAVKQRGLVTLERARLLHADVGAARPPEGDAVKLTVYLGRKQRVNGTPAYIGVCDLLHRRGLAGATVLLGVDGV VHGERRRASFFGRNVDVPMMIVVVGSGAHIGRVLPEIAALLRRPLFTLERVRVCKRDGQLLEPPHALPGVDERGLPLFQQ LTVYTSESARHGGVPIHRAIVARLRQATAADGATVLRGVWGFHGDHPPHGDGLFALTRRVPVVTIVIDTPAHIAESFAVI DELTGAEGLVTSEMVPALVSDDGGPGAGRMARHRY
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38395; Mature: 38395
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDDCLKLTTYLAERRRAGNRFVSDVLLDLYARHRVECAVLLRGIGGFGTGHRLRSDESL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE TLSEDPPVAIVATDTRTKIEALLDEVLAVKQRGLVTLERARLLHADVGAARPPEGDAVKL EECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCEEEE TVYLGRKQRVNGTPAYIGVCDLLHRRGLAGATVLLGVDGVVHGERRRASFFGRNVDVPMM EEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHHHHCCCCCCCCEE IVVVGSGAHIGRVLPEIAALLRRPLFTLERVRVCKRDGQLLEPPHALPGVDERGLPLFQQ EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH LTVYTSESARHGGVPIHRAIVARLRQATAADGATVLRGVWGFHGDHPPHGDGLFALTRRV HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHEECCC PVVTIVIDTPAHIAESFAVIDELTGAEGLVTSEMVPALVSDDGGPGAGRMARHRY CEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC >Mature Secondary Structure MDDDCLKLTTYLAERRRAGNRFVSDVLLDLYARHRVECAVLLRGIGGFGTGHRLRSDESL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE TLSEDPPVAIVATDTRTKIEALLDEVLAVKQRGLVTLERARLLHADVGAARPPEGDAVKL EECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCEEEE TVYLGRKQRVNGTPAYIGVCDLLHRRGLAGATVLLGVDGVVHGERRRASFFGRNVDVPMM EEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHHHHCCCCCCCCEE IVVVGSGAHIGRVLPEIAALLRRPLFTLERVRVCKRDGQLLEPPHALPGVDERGLPLFQQ EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH LTVYTSESARHGGVPIHRAIVARLRQATAADGATVLRGVWGFHGDHPPHGDGLFALTRRV HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHEECCC PVVTIVIDTPAHIAESFAVIDELTGAEGLVTSEMVPALVSDDGGPGAGRMARHRY CEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA