| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410400
Identifier: 41410400
GI number: 41410400
Start: 4770486
End: 4771694
Strand: Reverse
Name: 41410400
Synonym: MAP4302c
Alternate gene names: NA
Gene position: 4771694-4770486 (Counterclockwise)
Preceding gene: 41410401
Following gene: 41410399
Centisome position: 98.8
GC content: 69.15
Gene sequence:
>1209_bases ATGGGATTACGCGGGGAAGCCGCGATCGTCGGATATGTGGAGCTGCCGCCGGAGCGGCTCAGCAAGGCCTCGCCGGCGCC GTTCGTGCTGGAGCAGTGGGCCGAGCCGGGCGCGGCGGCACTGCAGGACGCCGGGCTGCCCGGCGAGGTGGTCAATGGGA TCGTCGCCTCGCACCTGGCCGAGTCCGAGATCTTCGTGCCCTCCACCATCGCCGAATACCTGGGCGTGGGCGCACGATTC GCCGAGCACGTCGTCCTGGGCGGGGCCAGCGCCGCGGCCATGGTGTGGCGCGCGGCCGCCGCGATCGAGCTCGGCATCTG CGACGCCGTGCTGTGCGCACTGCCCGCCCGCTACATCACGCCGTCGTCGAAGAAGAAACCCCGGCCGATGGTCGATGCGA TGTTCTTCGGCTCGTCGAGCAACCAATACGGTTCTCCGCAAGCCGAATTCGAGATCCCGTACGGTAACCTCGGCCAGAAC GGCCCGTACGGCCAGGTGGCCCAGCGCTACGCCGCGGTCTACGGCTACGACGAGCGGGCGATGGCCAAGATCGTCGTCGA CCAGCGGGTCAACGCCAACCACACCGACGGGGCGATCTGGCGGGACACGCCGCTGACCGTCGAGGACGTGCTGGCCAGCC CGGTCATCGCCGACCCGCTGCACATGCTCGAGATCGTCATGCCCTGTGTCGGCGGGGCCGCCGTCGTGGTCGCCAACGCG GACCTGGCCAAGCGGGCGCGTCATCGCCCGGTGTGGGTCAAGGGATTCGGCGAACACGTGCCGTTCAAGACCCCGACCTA CGCCGAGGACCTGCTGCGCACCCCGATCGCCGCGGCCGCCGACACCGCGTTCGCCATGACCGGCCTGAGCCGTGCCCAGA TGGACATGGTGTCGATCTACGACTGCTACACCATCACGGTGCTGCTGTCGCTGGAAGACGCCGGCTTCTGCGAGAAGGGC AGGGGCATGGAGTTCGTCGCCGACCATGACCTCACCTTCCGCGGCGACTTCCCACTCAACACCGCCGGCGGCCAATTGGG TTTCGGCCAAGCGGGTTTGGCCGGCGGCATGCACCACGTCTGCGACGCCACCCGCCAGATCATGGGCCGCGCCGGCGCGG CGCAGGTCCCCGACTGCAACCGGGCCTTCGTGTCCGGCAACGGGGGGATCCTGTCCGAGCAGACCACACTCATCCTCGAG GGAGACTGA
Upstream 100 bases:
>100_bases GCATCTGCCCGCCGAACTGATCGGCGGGGGCACCCGCGAGATCCAGCTCAACATCATCGCGCAGATGATCCTCGGACTAC CCCGAAAGTAGGTTGCGCAC
Downstream 100 bases:
>100_bases TCGCAATGACCACCTTCGAGCGGCCGATGCCCGTCAAAACGCCCACCACCGCGCCGTTTTGGGATGCGCTGGCGCAGCAT CGGATCGTCATCCAGTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLAESEIFVPSTIAEYLGVGARF AEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQN GPYGQVAQRYAAVYGYDERAMAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKG RGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILE GD
Sequences:
>Translated_402_residues MGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLAESEIFVPSTIAEYLGVGARF AEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQN GPYGQVAQRYAAVYGYDERAMAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKG RGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILE GD >Mature_401_residues GLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLAESEIFVPSTIAEYLGVGARFA EHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQNG PYGQVAQRYAAVYGYDERAMAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANAD LAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKGR GMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILEG D
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17537653, Length=307, Percent_Identity=24.4299674267101, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI19921506, Length=355, Percent_Identity=23.6619718309859, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585051, Length=360, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 42482; Mature: 42351
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLA CCCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHC ESEIFVPSTIAEYLGVGARFAEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYIT CCCCCCHHHHHHHHCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC PSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQNGPYGQVAQRYAAVYGYDERA CCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHH MAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA HHHHHHHCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECC DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIY HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH DCYTITVLLSLEDAGFCEKGRGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHV HHEEEEEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHCCCHHHH CDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILEGD HHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCEEEEEECC >Mature Secondary Structure GLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLA CCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHC ESEIFVPSTIAEYLGVGARFAEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYIT CCCCCCHHHHHHHHCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC PSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQNGPYGQVAQRYAAVYGYDERA CCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHH MAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA HHHHHHHCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECC DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIY HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH DCYTITVLLSLEDAGFCEKGRGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHV HHEEEEEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHCCCHHHH CDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILEGD HHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]