| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410393
Identifier: 41410393
GI number: 41410393
Start: 4762549
End: 4763199
Strand: Reverse
Name: 41410393
Synonym: MAP4295c
Alternate gene names: NA
Gene position: 4763199-4762549 (Counterclockwise)
Preceding gene: 41410394
Following gene: 41410389
Centisome position: 98.62
GC content: 70.51
Gene sequence:
>651_bases GTGAGCCCCCGAACCAGCAACGGGCTGCCGGTCACTGCCTACCTGGTGCTCGGCGTGCTGGCGGCCAACGACGAGCGACT CACCGCCGGCGAGATCAAGATGCGCGCCGAACTGTCGGTCGGCCACTTCTACTGGTCGCCGTCGGTCAGCCACGTGCGCC GCGAACTGACCCGGCTGCTGGCCCGCGGCATGGTCGCCCAGACCGGCTCGCAATCCGGCAAGCGGGCCATCACCTTGTAC GAGACCACCGACGCCGGGCGCGACGCGCTGCGCCGGTGGGTGCAGCATTTCCCGGGGCAGGACCAGGTGGTGATCAAACA CCCCGTCATCCTCAAGACCTGGCTGGCCCGCGGCGAGGATCCCGAACGCATCGTCGACACCCTGGAACGGCATCTGGACG CCACCCGGGCCCGGCTCGACGAGGCGCTGTGGTCGCGGCGGCGGTCGCAGGAACTCGGCATCACCGCGGACCCGGAGCAG CGGTTCTCCTTCGCCGTGCTGGACTACGCGATCCGCGGGCTGTACGCCGAGATCTCCAACATCTCCCAGCTGCGCGACGA GATCGCCGGCGGCACCAGCCGCGACCCGGTCAAACGGGTGCGACGGTCGAAGGGGCAGATCCGTCGCCGGGCACCCCGCA GTCCGGGCTAG
Upstream 100 bases:
>100_bases CGCCGGGCGACCTGCGCGTCGGGCTGCGGGTGCGGGTGCAGTTCCACACCGTCGCAGCCGACGTGACGCTGCCGTACTTC ACCGACGAGACGGACGGTTC
Downstream 100 bases:
>100_bases CCACCACCGTGTAGGCGGTGCCGCGCGGCTCGCGCTCCCAGAGCACCTCGCCGGCGGCTACCGCGGTGCCCTGCGAGATC AGTTGGCGTTTCAGCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator PadR Family Protein; PadR-Like Family Transcriptional Regulator; Padr Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSPRTSNGLPVTAYLVLGVLAANDERLTAGEIKMRAELSVGHFYWSPSVSHVRRELTRLLARGMVAQTGSQSGKRAITLY ETTDAGRDALRRWVQHFPGQDQVVIKHPVILKTWLARGEDPERIVDTLERHLDATRARLDEALWSRRRSQELGITADPEQ RFSFAVLDYAIRGLYAEISNISQLRDEIAGGTSRDPVKRVRRSKGQIRRRAPRSPG
Sequences:
>Translated_216_residues MSPRTSNGLPVTAYLVLGVLAANDERLTAGEIKMRAELSVGHFYWSPSVSHVRRELTRLLARGMVAQTGSQSGKRAITLY ETTDAGRDALRRWVQHFPGQDQVVIKHPVILKTWLARGEDPERIVDTLERHLDATRARLDEALWSRRRSQELGITADPEQ RFSFAVLDYAIRGLYAEISNISQLRDEIAGGTSRDPVKRVRRSKGQIRRRAPRSPG >Mature_215_residues SPRTSNGLPVTAYLVLGVLAANDERLTAGEIKMRAELSVGHFYWSPSVSHVRRELTRLLARGMVAQTGSQSGKRAITLYE TTDAGRDALRRWVQHFPGQDQVVIKHPVILKTWLARGEDPERIVDTLERHLDATRARLDEALWSRRRSQELGITADPEQR FSFAVLDYAIRGLYAEISNISQLRDEIAGGTSRDPVKRVRRSKGQIRRRAPRSPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24378; Mature: 24247
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRTSNGLPVTAYLVLGVLAANDERLTAGEIKMRAELSVGHFYWSPSVSHVRRELTRLL CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECEEEECCCHHHHHHHHHHHH ARGMVAQTGSQSGKRAITLYETTDAGRDALRRWVQHFPGQDQVVIKHPVILKTWLARGED HHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCC PERIVDTLERHLDATRARLDEALWSRRRSQELGITADPEQRFSFAVLDYAIRGLYAEISN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ISQLRDEIAGGTSRDPVKRVRRSKGQIRRRAPRSPG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SPRTSNGLPVTAYLVLGVLAANDERLTAGEIKMRAELSVGHFYWSPSVSHVRRELTRLL CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECEEEECCCHHHHHHHHHHHH ARGMVAQTGSQSGKRAITLYETTDAGRDALRRWVQHFPGQDQVVIKHPVILKTWLARGED HHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCC PERIVDTLERHLDATRARLDEALWSRRRSQELGITADPEQRFSFAVLDYAIRGLYAEISN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ISQLRDEIAGGTSRDPVKRVRRSKGQIRRRAPRSPG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA