| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410375
Identifier: 41410375
GI number: 41410375
Start: 4743915
End: 4744328
Strand: Reverse
Name: 41410375
Synonym: MAP4277c
Alternate gene names: NA
Gene position: 4744328-4743915 (Counterclockwise)
Preceding gene: 41410385
Following gene: 41410371
Centisome position: 98.23
GC content: 69.32
Gene sequence:
>414_bases GTGCGCGACCACCTCCCACCGGGTTTGCCGCCCGATCCTTTCGCCGACGACCCCTGTGATCCGTCGGCGGCGCTGGATGC CGTCGAGCCGGGACAGCCGCTGGATCAGCAGGAGCGGATGGCCGTCGAGGCCGACCTCGCCGATCTGGCCGTGTACGAGG CGCTGCTGGCACACAAGGGTATTCGCGGACTCGTGGTGTGCTGCGACGAGTGCCAGCAGGACCACTACCACGACTGGGAC ATGCTGCGGGCCAACCTGCTGCAGCTGTTGATCGACGGCACCGTGCGCCCGCACGAGCCCGCCTACGACCCCGAGCCGGA CGCCTACGTGACGTGGGATTACTGCCGGGGCTACGCCGACGCCTCACTCAACGAGGCGACGTCGGACGCCGACGGCTTCC ACCGCCGGCACTGA
Upstream 100 bases:
>100_bases CAGTCCGCTTGCTCGGGCGCGCCGTGCGGGCCAAACGGAACCGGAACGGCGGGTTGCTCCCTGCTGGCGTTATCCCGGCC GGGCTGCGTAGGCTAGAGGC
Downstream 100 bases:
>100_bases TTCACTGATTCGGATTCACCGGCGCCACCGCGGGTGGCTGGCCGTGATGGTGATGCTTGCCCACTGACGGGCTCGGCGAC GGGGTCGACGCGGGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRDHLPPGLPPDPFADDPCDPSAALDAVEPGQPLDQQERMAVEADLADLAVYEALLAHKGIRGLVVCCDECQQDHYHDWD MLRANLLQLLIDGTVRPHEPAYDPEPDAYVTWDYCRGYADASLNEATSDADGFHRRH
Sequences:
>Translated_137_residues MRDHLPPGLPPDPFADDPCDPSAALDAVEPGQPLDQQERMAVEADLADLAVYEALLAHKGIRGLVVCCDECQQDHYHDWD MLRANLLQLLIDGTVRPHEPAYDPEPDAYVTWDYCRGYADASLNEATSDADGFHRRH >Mature_137_residues MRDHLPPGLPPDPFADDPCDPSAALDAVEPGQPLDQQERMAVEADLADLAVYEALLAHKGIRGLVVCCDECQQDHYHDWD MLRANLLQLLIDGTVRPHEPAYDPEPDAYVTWDYCRGYADASLNEATSDADGFHRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3412 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15295; Mature: 15295
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDHLPPGLPPDPFADDPCDPSAALDAVEPGQPLDQQERMAVEADLADLAVYEALLAHKG CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC IRGLVVCCDECQQDHYHDWDMLRANLLQLLIDGTVRPHEPAYDPEPDAYVTWDYCRGYAD CCCEEHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCCCC ASLNEATSDADGFHRRH CCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDHLPPGLPPDPFADDPCDPSAALDAVEPGQPLDQQERMAVEADLADLAVYEALLAHKG CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC IRGLVVCCDECQQDHYHDWDMLRANLLQLLIDGTVRPHEPAYDPEPDAYVTWDYCRGYAD CCCEEHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCCCC ASLNEATSDADGFHRRH CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]