Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410342

Identifier: 41410342

GI number: 41410342

Start: 4713811

End: 4714107

Strand: Direct

Name: 41410342

Synonym: MAP4244

Alternate gene names: NA

Gene position: 4713811-4714107 (Clockwise)

Preceding gene: 41410341

Following gene: 41410343

Centisome position: 97.6

GC content: 70.37

Gene sequence:

>297_bases
GTGGACCCGACGCTGTCCTACAACTTCGGCGAAATCGAACACTCGGTGCGCCAGGAGATCCACACCACCTCGGCCCGCTT
CAACGCCGCGCTGGACGAGCTGAGAGCGCGAATCGCCCCGCTGCAGCAGCTGTGGACCAGCGAGGCCGCCACCGCCTACC
AGGCCGAGCAGCTGAAATGGCACCGGTCGGCGACGGCGCTCAACGAGATCTTGGTCCAGCTCGGCGACGCGGTCCGCGAC
GGGGCGGAGGAGGTGGCCGACGCCGACCGTCGGGCGGCCGGGGTCTGGGCACGCTAG

Upstream 100 bases:

>100_bases
CGACACCATCCGGCACAACGCGGCCACCCTGCAGGACGCCGGGCAAAACCATGCAGACCACATCGCCGCCGCCGGCGGCA
GCCTGTAAGGGGGCGATTCC

Downstream 100 bases:

>100_bases
CGGCGCGCCCGTCAACGTCTGTGTGGTCCCGGCGGAGGAGAGCCGTCGGGACCACACAGCCGTTTTGACCTGCGGGGACA
CCCGTCGGTAAGCTGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MDPTLSYNFGEIEHSVRQEIHTTSARFNAALDELRARIAPLQQLWTSEAATAYQAEQLKWHRSATALNEILVQLGDAVRD
GAEEVADADRRAAGVWAR

Sequences:

>Translated_98_residues
MDPTLSYNFGEIEHSVRQEIHTTSARFNAALDELRARIAPLQQLWTSEAATAYQAEQLKWHRSATALNEILVQLGDAVRD
GAEEVADADRRAAGVWAR
>Mature_98_residues
MDPTLSYNFGEIEHSVRQEIHTTSARFNAALDELRARIAPLQQLWTSEAATAYQAEQLKWHRSATALNEILVQLGDAVRD
GAEEVADADRRAAGVWAR

Specific function: Unknown

COG id: COG4842

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10948; Mature: 10948

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPTLSYNFGEIEHSVRQEIHTTSARFNAALDELRARIAPLQQLWTSEAATAYQAEQLKW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRSATALNEILVQLGDAVRDGAEEVADADRRAAGVWAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDPTLSYNFGEIEHSVRQEIHTTSARFNAALDELRARIAPLQQLWTSEAATAYQAEQLKW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRSATALNEILVQLGDAVRDGAEEVADADRRAAGVWAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA