Click here to switch to the map view.

The map label for this gene is infA

Identifier: 41410326

GI number: 41410326

Start: 4698329

End: 4698550

Strand: Direct

Name: infA

Synonym: MAP4228

Alternate gene names: 41410326

Gene position: 4698329-4698550 (Clockwise)

Preceding gene: 41410318

Following gene: 41410327

Centisome position: 97.28

GC content: 61.71

Gene sequence:

>222_bases
ATGGCCAAGAAGGACGGCGCCATAGAGGTCGAGGGCCGCGTGGTCGAGCCCCTGCCCAATGCGATGTTTCGCATTGAGCT
GGAGAACGGTCACAAGGTGCTTGCCCACATCAGCGGCAAGATGCGGCAGCATTACATCCGCATCCTGCCCGAGGACCGGG
TGGTCGTGGAGTTGTCTCCGTACGACCTGTCCCGGGGCCGCATCGTGTACCGCTACAAGTAA

Upstream 100 bases:

>100_bases
ATTTCCTGTCACCGGCTCACGTTCCAAGTCGGTGTGCAATGGTGCGCCGACCTGGGCGCATACCCGAACGAGACTAAACG
ACGAGGATTTTTAACCAGTT

Downstream 100 bases:

>100_bases
CGACACAGAACAGGATCGAACAGCCGTGAAGGTCAACCCGAGCGTCAAGCCAATCTGTGACAAGTGCAGGGTGATCCGTC
GGCATGGGCGGGTCATGGTG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVYRYK

Sequences:

>Translated_73_residues
MAKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVYRYK
>Mature_72_residues
AKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVYRYK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=73, Percent_Identity=68.4931506849315, Blast_Score=106, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8489; Mature: 8358

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSP
CCCCCCCEEECCEEECCCCCEEEEEEECCCCEEEEEECCHHCEEEEEECCCCCEEEEECC
YDLSRGRIVYRYK
CCCCCCEEEEEEC
>Mature Secondary Structure 
AKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSP
CCCCCCEEECCEEECCCCCEEEEEEECCCCEEEEEECCHHCEEEEEECCCCCEEEEECC
YDLSRGRIVYRYK
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA