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The map label for this gene is rpmC

Identifier: 41410267

GI number: 41410267

Start: 4642795

End: 4643028

Strand: Direct

Name: rpmC

Synonym: MAP4169

Alternate gene names: 41410267

Gene position: 4642795-4643028 (Clockwise)

Preceding gene: 41410266

Following gene: 41410268

Centisome position: 96.13

GC content: 63.25

Gene sequence:

>234_bases
ATGGCAGTGGGAATTTCGCCTGGCGAACTGCGTGAGCTCACCGACGACGAGCTGACCGAGCGGTTGCGCGAATCCAAGGA
AGAGCTGTTCAATCTGCGTTTCCAGATGGCGACCGGCCAGCTGACCAACAACCGCCGGCTGCGCACGGTGCGTCAGGAGA
TCGCGCGCGTCTACACCGTGCTGCGGGAACGTGAACTGGGCCTGGCAAGCGGGCCGGACGGTAAGGAATCGTGA

Upstream 100 bases:

>100_bases
TCAGCTACCCCAACGAGCAGACCGCCCGGGCGGCGCTGACCCGCGCGATCCACAAGTTGCCGATCAAGGCCCGCATCGTG
ACCCGAGAGGATCAGTTCTG

Downstream 100 bases:

>100_bases
TGGCAGAAGCGAAGAAGGCCGCCCCCAAGAAGGCCGCTACCGCCGCGTCCAAGGACGCAGATGCCAAGGGGCCCAAGCAC
ACTCCGCCCAACCCCAAGGT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTVLRERELGLASGPDGKES

Sequences:

>Translated_77_residues
MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTVLRERELGLASGPDGKES
>Mature_76_residues
AVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTVLRERELGLASGPDGKES

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_MYCA1 (A0QL10)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_883598.1
- ProteinModelPortal:   A0QL10
- SMR:   A0QL10
- STRING:   A0QL10
- EnsemblBacteria:   EBMYCT00000012453
- GeneID:   4528110
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_4463
- TIGR:   MAV_4463
- eggNOG:   COG0255
- GeneTree:   EBGT00050000017604
- HOGENOM:   HBG730819
- OMA:   RERDIGI
- ProtClustDB:   PRK00306
- BioCyc:   MAVI243243:MAV_4463-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8848; Mature: 8717

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRERELGLASGPDGKES
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRERELGLASGPDGKES
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA