| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410254
Identifier: 41410254
GI number: 41410254
Start: 4633925
End: 4634578
Strand: Direct
Name: 41410254
Synonym: MAP4156
Alternate gene names: NA
Gene position: 4633925-4634578 (Clockwise)
Preceding gene: 41410253
Following gene: 41410255
Centisome position: 95.94
GC content: 73.7
Gene sequence:
>654_bases ATGACCGCGCCGGCGCCGCGGTTGCCGGACGGGTTCGCCGTCCAGGTCGATCGCCGGGTGCGGGTGCTCGGCGACGGCTC GGCACTGCTCGGCGGGTCGCCGACCCGGCTGCTGAAGCTGGCCCCGGCCGCCCAGGACCTGCTGTGCGACGGCCGGCTGA AGGTCCGCGACGACGTCAGCGCGCAGTTGGCCCGCACCCTGCTGGACGCCACCGTGGCGCATCCGCGGCCCGCGGGCGGG CCCTCGCACCACGACGTCACCGTGGTAATTCCGGTGCGGGACAACCTTTCTGGCGTGCGACGGCTGGTGAGCTCGCTGCG CGGTCTGCGCGTGGTGGTGGTGGACGACGGATCGTTCCCGCCGATCGAGCCGGAAGACTTCGTCGGCGCGCACTGCGACA TCGAGGTGCTGCGCCACCACCGCAGCAAGGGACCGGCGGCCGCGCGCAACACGGGGCTGGCGGCCTGCCGCACGGACTTC GTCGCCTTCCTGGACTCCGATGTCGCGCCGCGCCGGGGCTGGCTGGAAGCGCTGCTCGGCCACTTCTGCGACCCGACCGT CGGGGCTGGTCGCGCCGCGCATCGTCGGCCTGTCGCACAGCGAGAACGTGGTGGCCCGCTACGAGGCGGTGCACTCCTCG CTCGACCTCGGTGA
Upstream 100 bases:
>100_bases CCGCCACCGCCGCCGAGGGCGAGCGCATCCTGTCCGAGATGGTGAACGAGTGCGTCCGCCGGGTCGCCCGGTGGCGGCCC GGGCCCGACGGGATGCTCGC
Downstream 100 bases:
>100_bases GCGCGAGGCGCCGGTGCTGCCGCACAGCACGGTGTCCTACGTGCCCAGCGCGGCGATCATCTGCCGGTGCTCGGCGATCC GCGAGATCGGCGGATTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTAPAPRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLKLAPAAQDLLCDGRLKVRDDVSAQLARTLLDATVAHPRPAGG PSHHDVTVVIPVRDNLSGVRRLVSSLRGLRVVVVDDGSFPPIEPEDFVGAHCDIEVLRHHRSKGPAAARNTGLAACRTDF VAFLDSDVAPRRGWLEALLGHFCDPTVGAGRAAHRRPVAQRERGGPLRGGALLARPR
Sequences:
>Translated_217_residues MTAPAPRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLKLAPAAQDLLCDGRLKVRDDVSAQLARTLLDATVAHPRPAGG PSHHDVTVVIPVRDNLSGVRRLVSSLRGLRVVVVDDGSFPPIEPEDFVGAHCDIEVLRHHRSKGPAAARNTGLAACRTDF VAFLDSDVAPRRGWLEALLGHFCDPTVGAGRAAHRRPVAQRERGGPLRGGALLARPR >Mature_216_residues TAPAPRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLKLAPAAQDLLCDGRLKVRDDVSAQLARTLLDATVAHPRPAGGP SHHDVTVVIPVRDNLSGVRRLVSSLRGLRVVVVDDGSFPPIEPEDFVGAHCDIEVLRHHRSKGPAAARNTGLAACRTDFV AFLDSDVAPRRGWLEALLGHFCDPTVGAGRAAHRRPVAQRERGGPLRGGALLARPR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 23108; Mature: 22977
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPAPRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLKLAPAAQDLLCDGRLKVRDDVS CCCCCCCCCCCEEEEECCEEEEEECCCEEECCCHHHEEEECCCHHHHHCCCCEEECCCHH AQLARTLLDATVAHPRPAGGPSHHDVTVVIPVRDNLSGVRRLVSSLRGLRVVVVDDGSFP HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCC PIEPEDFVGAHCDIEVLRHHRSKGPAAARNTGLAACRTDFVAFLDSDVAPRRGWLEALLG CCCCHHHCCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH HFCDPTVGAGRAAHRRPVAQRERGGPLRGGALLARPR HCCCCCCCCCCHHHCCCCHHHHCCCCCCCCEEECCCC >Mature Secondary Structure TAPAPRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLKLAPAAQDLLCDGRLKVRDDVS CCCCCCCCCCEEEEECCEEEEEECCCEEECCCHHHEEEECCCHHHHHCCCCEEECCCHH AQLARTLLDATVAHPRPAGGPSHHDVTVVIPVRDNLSGVRRLVSSLRGLRVVVVDDGSFP HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCC PIEPEDFVGAHCDIEVLRHHRSKGPAAARNTGLAACRTDFVAFLDSDVAPRRGWLEALLG CCCCHHHCCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH HFCDPTVGAGRAAHRRPVAQRERGGPLRGGALLARPR HCCCCCCCCCCHHHCCCCHHHHCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7836301 [H]