| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fabD2
Identifier: 41410220
GI number: 41410220
Start: 4595953
End: 4596570
Strand: Direct
Name: fabD2
Synonym: MAP4122
Alternate gene names: NA
Gene position: 4595953-4596570 (Clockwise)
Preceding gene: 41410219
Following gene: 41410221
Centisome position: 95.16
GC content: 76.21
Gene sequence:
>618_bases ATGAGCGGCCACCCGGTTGCGACCGTTGCCGGCGTCCCGGTTTCCTCCGTCGAGGTCGACGCCGCCGAGGCCCGGTTGCG CGGCGGGCGCGGGGCGGCGGCGCTGCCGACGCCCGGCACCAGCGAGGGCCGGCAACTGCGGCGCTGGCTGACCCAACTGA TCGTGACCCGCCGCGTCATCGCCGCCGAGGCGGCCGCCCGCGGCCTGACCCCGGCCGGCGCGCCGAACGAGGCCGAGCTG TTGCCCGACGTGACCGCCCGGCTGGAGATCGGCAGCGTGGCCGCCGCCGTGCTGGCCGACCCGCTGGCCCGAGCGTTGTT CGCCGACGTCACCGCCGCGGTGGACGTCGCCGAGCGGGAGCTGGCCGCCTACCACGCCCGCAACCCGCTCCGGTTCGCCC CATCGCGGCCCGTCCAAAATGTTTGGCGCACAACGGCTTTGGTTGCCCCGCCGCTGGACGAGGTGCGACCGGTGATCCGC GAGCAGTTGCGCGGCGCGGCGCGGCGGCGGGCGTTTCGGCTGTGGCTGGACGAACGCCGCGCCGCGCTGGTGCGGCTCGC GCCCGGCTACGAGCATCCCGGCGACCCCCGCCAACCCGACAACACGCATCGGCACTGA
Upstream 100 bases:
>100_bases CCCCGCCGGCCTGGCTGGACCCCGGCCAGTGGTGGGCGCTGGTCCGGATCGGCTGCGCGGGCGAACTGCTCTACTCGCCG GCGGTGCGGGTGACGGTCAC
Downstream 100 bases:
>100_bases TCGGCATGCTCACCCTCGGCCTGGACATCGGCGGCACCAAAATCGCTGCCGCACTTGTTGATTCGGTCGGCACGCTGGTC CACACCGCTGTCCGCCCCAC
Product: FabD2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSGHPVATVAGVPVSSVEVDAAEARLRGGRGAAALPTPGTSEGRQLRRWLTQLIVTRRVIAAEAAARGLTPAGAPNEAEL LPDVTARLEIGSVAAAVLADPLARALFADVTAAVDVAERELAAYHARNPLRFAPSRPVQNVWRTTALVAPPLDEVRPVIR EQLRGAARRRAFRLWLDERRAALVRLAPGYEHPGDPRQPDNTHRH
Sequences:
>Translated_205_residues MSGHPVATVAGVPVSSVEVDAAEARLRGGRGAAALPTPGTSEGRQLRRWLTQLIVTRRVIAAEAAARGLTPAGAPNEAEL LPDVTARLEIGSVAAAVLADPLARALFADVTAAVDVAERELAAYHARNPLRFAPSRPVQNVWRTTALVAPPLDEVRPVIR EQLRGAARRRAFRLWLDERRAALVRLAPGYEHPGDPRQPDNTHRH >Mature_204_residues SGHPVATVAGVPVSSVEVDAAEARLRGGRGAAALPTPGTSEGRQLRRWLTQLIVTRRVIAAEAAARGLTPAGAPNEAELL PDVTARLEIGSVAAAVLADPLARALFADVTAAVDVAERELAAYHARNPLRFAPSRPVQNVWRTTALVAPPLDEVRPVIRE QLRGAARRRAFRLWLDERRAALVRLAPGYEHPGDPRQPDNTHRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22054; Mature: 21923
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHPVATVAGVPVSSVEVDAAEARLRGGRGAAALPTPGTSEGRQLRRWLTQLIVTRRVI CCCCCCEEECCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AAEAAARGLTPAGAPNEAELLPDVTARLEIGSVAAAVLADPLARALFADVTAAVDVAERE HHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAYHARNPLRFAPSRPVQNVWRTTALVAPPLDEVRPVIREQLRGAARRRAFRLWLDERR HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALVRLAPGYEHPGDPRQPDNTHRH HHHEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGHPVATVAGVPVSSVEVDAAEARLRGGRGAAALPTPGTSEGRQLRRWLTQLIVTRRVI CCCCCEEECCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AAEAAARGLTPAGAPNEAELLPDVTARLEIGSVAAAVLADPLARALFADVTAAVDVAERE HHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAYHARNPLRFAPSRPVQNVWRTTALVAPPLDEVRPVIREQLRGAARRRAFRLWLDERR HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALVRLAPGYEHPGDPRQPDNTHRH HHHEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA