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The map label for this gene is 41409970

Identifier: 41409970

GI number: 41409970

Start: 4333756

End: 4334196

Strand: Direct

Name: 41409970

Synonym: MAP3872

Alternate gene names: NA

Gene position: 4333756-4334196 (Clockwise)

Preceding gene: 41409969

Following gene: 41409971

Centisome position: 89.73

GC content: 68.48

Gene sequence:

>441_bases
ATGAGCACCGAGCGCGCACACTCCTACGCGGGGGACGTTTCGCCGCTGGAAGCATGGAAACTGCTCAGCGACAATCCGAA
CGCCGTGCTGGTCGACGTGCGCACCGACGCCGAATGGCGCTTCGTCGGGGTGCCCGATCTGTCCAGCCTGGGCCGCGAGG
TGGTCTTCCTGGAGTGGAACACCTCCGACGGCAGGCACAACCCGGACTTCGCCGACCAGCTGCGCCGGCAGATCGAGCCG
GCGCCGGCCGGCCAGGAGCGCCCGGTGCTGTTCCTGTGCCGCTCGGGTAACCGCTCCATCGGCGCCGCCGAGGTGGCGAC
CCAGCTGGGCATCACGCCGGCCTACAACGTGCTGGACGGCTTCGAGGGTCATCTCGACGCCAACGGCCACCGCGGTGAAA
CAGGTTGGCGGGCAATCGGTTTGCCCTGGAAGCAGGGATAG

Upstream 100 bases:

>100_bases
GGCGCGGGCGGCTGAGCCGCGGCGGCGCCGGCGCGACGGCCTCGATACGATCGCAGGTCAGGGTGGCCGGCAATGCGTAC
CGAGACGAGGGGACACCAAC

Downstream 100 bases:

>100_bases
CCCGGATGAGTCAGGCCGGCGACGATTCGGTCCGCACGCCCCCCGCGCTGCCCGACGGCGTCAGCCAGGCGACCATCGGC
GTGCGCGGCGGACTACTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSTERAHSYAGDVSPLEAWKLLSDNPNAVLVDVRTDAEWRFVGVPDLSSLGREVVFLEWNTSDGRHNPDFADQLRRQIEP
APAGQERPVLFLCRSGNRSIGAAEVATQLGITPAYNVLDGFEGHLDANGHRGETGWRAIGLPWKQG

Sequences:

>Translated_146_residues
MSTERAHSYAGDVSPLEAWKLLSDNPNAVLVDVRTDAEWRFVGVPDLSSLGREVVFLEWNTSDGRHNPDFADQLRRQIEP
APAGQERPVLFLCRSGNRSIGAAEVATQLGITPAYNVLDGFEGHLDANGHRGETGWRAIGLPWKQG
>Mature_145_residues
STERAHSYAGDVSPLEAWKLLSDNPNAVLVDVRTDAEWRFVGVPDLSSLGREVVFLEWNTSDGRHNPDFADQLRRQIEPA
PAGQERPVLFLCRSGNRSIGAAEVATQLGITPAYNVLDGFEGHLDANGHRGETGWRAIGLPWKQG

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 16049; Mature: 15918

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTERAHSYAGDVSPLEAWKLLSDNPNAVLVDVRTDAEWRFVGVPDLSSLGREVVFLEWN
CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHCCCEEEEEEEC
TSDGRHNPDFADQLRRQIEPAPAGQERPVLFLCRSGNRSIGAAEVATQLGITPAYNVLDG
CCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHCC
FEGHLDANGHRGETGWRAIGLPWKQG
CCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
STERAHSYAGDVSPLEAWKLLSDNPNAVLVDVRTDAEWRFVGVPDLSSLGREVVFLEWN
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHCCCEEEEEEEC
TSDGRHNPDFADQLRRQIEPAPAGQERPVLFLCRSGNRSIGAAEVATQLGITPAYNVLDG
CCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHCC
FEGHLDANGHRGETGWRAIGLPWKQG
CCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11319266 [H]