The gene/protein map for NC_002944 is currently unavailable.
Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409937

Identifier: 41409937

GI number: 41409937

Start: 4294702

End: 4295307

Strand: Reverse

Name: 41409937

Synonym: MAP3839c

Alternate gene names: NA

Gene position: 4295307-4294702 (Counterclockwise)

Preceding gene: 41409948

Following gene: 41409936

Centisome position: 88.93

GC content: 66.01

Gene sequence:

>606_bases
TTGCCGATGTCTACCGATGAACTCGACCAACTCTTGCTCGATCGGTTCAACTTGCGCCGCTCCGACCTGATCGCGGCGCT
TAAAACGCTCTCCGCGCACCGGCCGTGGGCGGCCACGCTGACCACCGACGAGGCCCGGCTGCTCGATGACGCCGGTTTCA
CCGAAGATCCCGGAGCCTACGCGGAGATCGCAGCCGACGTCACCGCCCATATGGCCAGGCTGTACGGCACGGCCTACAGC
GCCGCCGACGTCAGCAAAGGACTCGGCGTCAACGACTCCCGCGTGAGGCAACGCCGCCTCGCCCACACGCTATGGGCTAT
CGACGACGGCGGCACCTGGGTGTACCCCGCGATCCAGTTCGAGATCGTCGACCGCGGCCGCGACGAGCCCCTCACGCTCA
AACAGGTCCGCGGCCTGGACGCGGTGCTGCCGGCTCTGCTCGCTAGGGACCTGCATCCCACCGCGGTGGCCGGCTTTCTC
ATGACGGCGCAACCCGATTTACGAATCGACGGTCAGCCGAAGTCGGTGCGGGACTGGCTGTTACACGGTGAATCCGTCGG
GCCGGTACTCGAACTGATCGAGATCGCCGATTGGACCGCGACTTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGCCCGCATCTTGTTCCCGGGGGCTATCGTTCGAGCCAGAATCCATCTAACGGTGATAGAATTCTGTTAATTT
CCGTTAGCGCGCGCGAAGGC

Downstream 100 bases:

>100_bases
CCGTCGACCCCATGCTGCCGGAACCTCCGGCACCGCACATATTGCGCTCGCTCGGCATCGGCGACGACGAGATGCGCGCG
ATCGGCGTCGATGAGATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPMSTDELDQLLLDRFNLRRSDLIAALKTLSAHRPWAATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYS
AADVSKGLGVNDSRVRQRRLAHTLWAIDDGGTWVYPAIQFEIVDRGRDEPLTLKQVRGLDAVLPALLARDLHPTAVAGFL
MTAQPDLRIDGQPKSVRDWLLHGESVGPVLELIEIADWTAT

Sequences:

>Translated_201_residues
MPMSTDELDQLLLDRFNLRRSDLIAALKTLSAHRPWAATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYS
AADVSKGLGVNDSRVRQRRLAHTLWAIDDGGTWVYPAIQFEIVDRGRDEPLTLKQVRGLDAVLPALLARDLHPTAVAGFL
MTAQPDLRIDGQPKSVRDWLLHGESVGPVLELIEIADWTAT
>Mature_200_residues
PMSTDELDQLLLDRFNLRRSDLIAALKTLSAHRPWAATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYSA
ADVSKGLGVNDSRVRQRRLAHTLWAIDDGGTWVYPAIQFEIVDRGRDEPLTLKQVRGLDAVLPALLARDLHPTAVAGFLM
TAQPDLRIDGQPKSVRDWLLHGESVGPVLELIEIADWTAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22097; Mature: 21966

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSTDELDQLLLDRFNLRRSDLIAALKTLSAHRPWAATLTTDEARLLDDAGFTEDPGAY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCCHH
AEIAADVTAHMARLYGTAYSAADVSKGLGVNDSRVRQRRLAHTLWAIDDGGTWVYPAIQF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCEEEEEEEEE
EIVDRGRDEPLTLKQVRGLDAVLPALLARDLHPTAVAGFLMTAQPDLRIDGQPKSVRDWL
EEECCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHH
LHGESVGPVLELIEIADWTAT
HCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PMSTDELDQLLLDRFNLRRSDLIAALKTLSAHRPWAATLTTDEARLLDDAGFTEDPGAY
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCCHH
AEIAADVTAHMARLYGTAYSAADVSKGLGVNDSRVRQRRLAHTLWAIDDGGTWVYPAIQF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCEEEEEEEEE
EIVDRGRDEPLTLKQVRGLDAVLPALLARDLHPTAVAGFLMTAQPDLRIDGQPKSVRDWL
EEECCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHH
LHGESVGPVLELIEIADWTAT
HCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA