| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409919
Identifier: 41409919
GI number: 41409919
Start: 4269439
End: 4271511
Strand: Direct
Name: 41409919
Synonym: MAP3821
Alternate gene names: NA
Gene position: 4269439-4271511 (Clockwise)
Preceding gene: 41409918
Following gene: 41409920
Centisome position: 88.4
GC content: 74.58
Gene sequence:
>2073_bases TTGGAGGGGTTTGTCTTGAATATCGTGCTCGGGGTGTCGATGGCACCGTCTTCGATCCAAATGGTCGTTCTGGAAGGCGA ATACGCCGATGGCGCGACGGTGGAAGAGGACGCGATCGATGTCACCGGCGCCGATGACGCGGCCACCGCGAGCGCCCCGG ATCGGGTGATCTCGGCCATTCTGGGCACCCGGGAGGGCGCCGCCGACGCCGGCCTGCAGCTCTCCTCCATCGGGGTGACG TGGACCGATCAACTCGAAGCCGCGGCCCTGCGCGACGCGTTGGCGGCTCGCCGGATCGACAATGTCATGCTGGTCTCGGC GTTTCTGGCGGCTGCGGCGCTGGCGCAAAACGTCGGCGGCGCAATGGGTTACGAGCGCACCGCGGTGCTGCTGGTGGAAC CCGATACCGCGACCCTGGCGGTCGTCGAGACCTCCGACGGTTCCATCCCCGATGTCTACAAGCAGCAGATTCGCGCCGAG TCCTACGGCGACGCGGCCGGGCAGCTCAGCGCGATGGTCGCCGGGCTGGAGAAGCTGGAGTCCCTGCCGGGCGGGCTGTT GCTCGTCGGCTCGGGCGTCGACGTCGCTCCGCTCAAGCAGGTGCTGCAGACCACGACGTTCCTCGACGTGAGTGTGGCCG AGGAGCCGGAGACCGCGCTGGCCCGCGGGGCCGCCCTGGCCGCGGCGAACGCGCCGCTGTTCGCGTCGTCGACGGCGGCG CTGGCCTACGCACAAGACCCCGGCACCGGCGCTGTCGACCAGTACTCGCTGCCCGACTACCTCTATGTCCCCGTCGGTCC CGAGCCCGGCGACGACGAACTCGCCTACAGCGCGGTGGGGGACGAGGACGCCGAGTCGCCGACCGTCGTCATCGAGAAGC TGTTCCTTCCCGAGGACAGTGAGCCGCGTCGACGGCCGGTCCTGCTGGTGGGCAGCGGGCTGGCGGTGGTAGGCATCAGC GCGGTGCTGGCGCTGGAGATCGCGTTGGCGATCGGCATCCGTACCACCGGAACCGTGGCGTTGCAACCTACTCCGAATCA ACATCTGATCGTTCCCACCGAGCAGGCGCCGGCACCGCCGCCGGTGCAGGCGTCGGCACCGCAGCCCAAGATCAGCGTGC CCGAGCCGGTGGCGGCGCCCAAGCCGTTGAGCCTGCCGGTCGCCGCGCCGTTGCCGGCCGCCCCGCCGCCGGCTGCGCCG CCGCTTCCGGAGGCGCCGCCGATCCCCGCGGCCCCGCCGGTGGTGCCGGTCCCGGTGGTGGTCCCGCCGGTCCCGGTTCC GGTGCCGGTCCGCATCCCGGTGCCCGATCCGGTCAGCCCGCCGCAGCTGCTGGCGCCGCCGCGGCTGTCGGTTCCACAGC CGGTGCAACCGCCGGTGCGCGTCCCGCAGCCGCCGTCGCCTCCGCAGGTCGGCGGCACTGTTCCGCAGTCACCGCCGCAG CACCAGACCCCGCCCGGCGAAGGCACGCCGCCCAAGCCGGACAGCCCCGGCAACTACGGCGGCGGTCACGCGCCCACCCC CGGCGCCGGCGGTTCGGGTGGCTCGGGCGGCGGTCACGTTCCCACGCCCGGTGCCGGTGGCTCGGGCGGCGGTCATGTTC CCACGCCCGGTGCCGGTGGCTCGGGCGGCGGTCACGTTCCCACGCCCGGTGCCGGTGGCCCGGGCGGCACCGGTGGATCG GGTGGCGGGCACGTTCCGACGCCCGGGGCGGGTACCCCGGGTGGCTCCGGTGGCGGTCACCTTCCCATCCCGGGCGCGGG CAGCACTCCGGGCGGCTCGGGTGGCGGTCACCTTCCCACTCCAGGTGCCGGTACGCCCGGCGGCGGCTTGGGCGGGTTCG GCGGTGGCCACGCCCCGGCGCCCGGGGGCGGCCTGGGCGGGTTCGGCGGTGGCCACGCCCCGGCGCCCGGCGGCGGCTTG GGCGGGTTCGGCGGTGGCCACGCTCCGGCGCCCGGCGGTGGCCTGGGCGGGTTCGGCGGGGGCCACGCCCCGGCGCCCGG CGGCGGCTTGGGTGGCTCCGGCGGTGGTCACAGCGGCGGCGGCCTGGGCGGACTCGGCGGCGGGCACAAATAG
Upstream 100 bases:
>100_bases TCTACATAGGTTCTGCGGGGCTCTCACGCCACCGTTCTGCGCGATACTTAGTTAGCCGTGGTTTTTTCCTCCGCCTGGCC GTGGCGATTGCGCAACACCT
Downstream 100 bases:
>100_bases CCCCGCGCCGACCACTCCGTCGACCCGCGCCACGACGCAGGCCGAGATCACACGAGTAGGGTTGCGGTATTGAGGCTGGC GAAAAGACGCCGCCTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MEGFVLNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAILGTREGAADAGLQLSSIGVT WTDQLEAAALRDALAARRIDNVMLVSAFLAAAALAQNVGGAMGYERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAE SYGDAAGQLSAMVAGLEKLESLPGGLLLVGSGVDVAPLKQVLQTTTFLDVSVAEEPETALARGAALAAANAPLFASSTAA LAYAQDPGTGAVDQYSLPDYLYVPVGPEPGDDELAYSAVGDEDAESPTVVIEKLFLPEDSEPRRRPVLLVGSGLAVVGIS AVLALEIALAIGIRTTGTVALQPTPNQHLIVPTEQAPAPPPVQASAPQPKISVPEPVAAPKPLSLPVAAPLPAAPPPAAP PLPEAPPIPAAPPVVPVPVVVPPVPVPVPVRIPVPDPVSPPQLLAPPRLSVPQPVQPPVRVPQPPSPPQVGGTVPQSPPQ HQTPPGEGTPPKPDSPGNYGGGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGGSGGGHVPTPGAGGPGGTGGS GGGHVPTPGAGTPGGSGGGHLPIPGAGSTPGGSGGGHLPTPGAGTPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGL GGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGSGGGHSGGGLGGLGGGHK
Sequences:
>Translated_690_residues MEGFVLNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAILGTREGAADAGLQLSSIGVT WTDQLEAAALRDALAARRIDNVMLVSAFLAAAALAQNVGGAMGYERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAE SYGDAAGQLSAMVAGLEKLESLPGGLLLVGSGVDVAPLKQVLQTTTFLDVSVAEEPETALARGAALAAANAPLFASSTAA LAYAQDPGTGAVDQYSLPDYLYVPVGPEPGDDELAYSAVGDEDAESPTVVIEKLFLPEDSEPRRRPVLLVGSGLAVVGIS AVLALEIALAIGIRTTGTVALQPTPNQHLIVPTEQAPAPPPVQASAPQPKISVPEPVAAPKPLSLPVAAPLPAAPPPAAP PLPEAPPIPAAPPVVPVPVVVPPVPVPVPVRIPVPDPVSPPQLLAPPRLSVPQPVQPPVRVPQPPSPPQVGGTVPQSPPQ HQTPPGEGTPPKPDSPGNYGGGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGGSGGGHVPTPGAGGPGGTGGS GGGHVPTPGAGTPGGSGGGHLPIPGAGSTPGGSGGGHLPTPGAGTPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGL GGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGSGGGHSGGGLGGLGGGHK >Mature_690_residues MEGFVLNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAILGTREGAADAGLQLSSIGVT WTDQLEAAALRDALAARRIDNVMLVSAFLAAAALAQNVGGAMGYERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAE SYGDAAGQLSAMVAGLEKLESLPGGLLLVGSGVDVAPLKQVLQTTTFLDVSVAEEPETALARGAALAAANAPLFASSTAA LAYAQDPGTGAVDQYSLPDYLYVPVGPEPGDDELAYSAVGDEDAESPTVVIEKLFLPEDSEPRRRPVLLVGSGLAVVGIS AVLALEIALAIGIRTTGTVALQPTPNQHLIVPTEQAPAPPPVQASAPQPKISVPEPVAAPKPLSLPVAAPLPAAPPPAAP PLPEAPPIPAAPPVVPVPVVVPPVPVPVPVRIPVPDPVSPPQLLAPPRLSVPQPVQPPVRVPQPPSPPQVGGTVPQSPPQ HQTPPGEGTPPKPDSPGNYGGGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGGSGGGHVPTPGAGGPGGTGGS GGGHVPTPGAGTPGGSGGGHLPIPGAGSTPGGSGGGHLPTPGAGTPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGL GGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGSGGGHSGGGLGGLGGGHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65770; Mature: 65770
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGFVLNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAI CCCEEEEEEEECEECCCCEEEEEEECCCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHH LGTREGAADAGLQLSSIGVTWTDQLEAAALRDALAARRIDNVMLVSAFLAAAALAQNVGG HHCCCCCHHCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AMGYERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAESYGDAAGQLSAMVAGLEKLE CCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SLPGGLLLVGSGVDVAPLKQVLQTTTFLDVSVAEEPETALARGAALAAANAPLFASSTAA HCCCCEEEEECCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCEE LAYAQDPGTGAVDQYSLPDYLYVPVGPEPGDDELAYSAVGDEDAESPTVVIEKLFLPEDS EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCC EPRRRPVLLVGSGLAVVGISAVLALEIALAIGIRTTGTVALQPTPNQHLIVPTEQAPAPP CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCCC PVQASAPQPKISVPEPVAAPKPLSLPVAAPLPAAPPPAAPPLPEAPPIPAAPPVVPVPVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEE VPPVPVPVPVRIPVPDPVSPPQLLAPPRLSVPQPVQPPVRVPQPPSPPQVGGTVPQSPPQ ECCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HQTPPGEGTPPKPDSPGNYGGGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGGHVPTPGAGGPGGTGGSGGGHVPTPGAGTPGGSGGGHLPIPGAGSTPGGSGGGHLPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAGTPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGFGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHAPAPGGGLGGSGGGHSGGGLGGLGGGHK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEGFVLNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAI CCCEEEEEEEECEECCCCEEEEEEECCCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHH LGTREGAADAGLQLSSIGVTWTDQLEAAALRDALAARRIDNVMLVSAFLAAAALAQNVGG HHCCCCCHHCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AMGYERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAESYGDAAGQLSAMVAGLEKLE CCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SLPGGLLLVGSGVDVAPLKQVLQTTTFLDVSVAEEPETALARGAALAAANAPLFASSTAA HCCCCEEEEECCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCEE LAYAQDPGTGAVDQYSLPDYLYVPVGPEPGDDELAYSAVGDEDAESPTVVIEKLFLPEDS EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCC EPRRRPVLLVGSGLAVVGISAVLALEIALAIGIRTTGTVALQPTPNQHLIVPTEQAPAPP CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCCC PVQASAPQPKISVPEPVAAPKPLSLPVAAPLPAAPPPAAPPLPEAPPIPAAPPVVPVPVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEE VPPVPVPVPVRIPVPDPVSPPQLLAPPRLSVPQPVQPPVRVPQPPSPPQVGGTVPQSPPQ ECCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HQTPPGEGTPPKPDSPGNYGGGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGGHVPTPGAGGPGGTGGSGGGHVPTPGAGTPGGSGGGHLPIPGAGSTPGGSGGGHLPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAGTPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGFGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHAPAPGGGLGGSGGGHSGGGLGGLGGGHK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA