| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409909
Identifier: 41409909
GI number: 41409909
Start: 4258893
End: 4259444
Strand: Direct
Name: 41409909
Synonym: MAP3811
Alternate gene names: NA
Gene position: 4258893-4259444 (Clockwise)
Preceding gene: 41409905
Following gene: 41409911
Centisome position: 88.18
GC content: 77.72
Gene sequence:
>552_bases TTGACGCTGATGGCGATCGTCGATCGGTTCAACATGAAAGTGGTTGCGAGCGCTGGGTTGTGCGGAGCGGCCATAGCGTT GAGCCCCGATGCGGCGGCCGCCCCGCTGATAACGGGCGGCCACGCGTGCATTCAGGGGCAGTCGGGCGAAGTGGCGCCCG CCGCCGGTGGTCCGGTCGCCGGCGGTGCGCCCGCGGCCGGTGGTGCGGTGGCCGCGGGTGCGACCGACATGTGCGCGGCC CCCCTCACCGACATGTCCGGCGTGCCGATGGCCGTGCCCGGGCCGGTGCCGCTCGGCGCTCCGGTGCCGGTGCCGCTGGG CGCTCCGTTGCCGCTGGGTGCCCCCGTGCCACTCGCGCCCCCGGTGCCGGTGGTGCCGGCCGGCGCGCCGCTGATCGCGC TCGGCGGGCCGGCCGCGGCCGGCGCCCCGGTGGAGGCGGCCGCTCCCCTCATCGACATGTCGGGTGTGAAGGACGCGCCG ACCGGCCCGGCGCCCACCGGCGGTCCGGTGCCCGGTCAGCCGGTGCGGCCCGGCCCCTCGGGCGCCAGCTGA
Upstream 100 bases:
>100_bases GCTACCGACAATTAGCCCGGTCGTGAAAAGGCCGGGTACGGCGAAGCGGGTCTGCTGCACCAAAACATTGCCGAACTAGC AGAGCGTGGATGAAGGGAAG
Downstream 100 bases:
>100_bases CGCTTCGTTCGCTTACAGCGGGCCCGCCGGTTTGCATGCCGGTGGGCCCGCTTTCGTTGTGGGAGTGGGTATTTCCTGTT CCAGGTGCCGGGACGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTLMAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQGQSGEVAPAAGGPVAGGAPAAGGAVAAGATDMCAA PLTDMSGVPMAVPGPVPLGAPVPVPLGAPLPLGAPVPLAPPVPVVPAGAPLIALGGPAAAGAPVEAAAPLIDMSGVKDAP TGPAPTGGPVPGQPVRPGPSGAS
Sequences:
>Translated_183_residues MTLMAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQGQSGEVAPAAGGPVAGGAPAAGGAVAAGATDMCAA PLTDMSGVPMAVPGPVPLGAPVPVPLGAPLPLGAPVPLAPPVPVVPAGAPLIALGGPAAAGAPVEAAAPLIDMSGVKDAP TGPAPTGGPVPGQPVRPGPSGAS >Mature_182_residues TLMAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQGQSGEVAPAAGGPVAGGAPAAGGAVAAGATDMCAAP LTDMSGVPMAVPGPVPLGAPVPVPLGAPLPLGAPVPLAPPVPVVPAGAPLIALGGPAAAGAPVEAAAPLIDMSGVKDAPT GPAPTGGPVPGQPVRPGPSGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16641; Mature: 16509
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQGQSGEVAPAAGGPVA CHHHHEEHHCCEEEEECCCCCCEEEEECCCCCCCCEEECCCEEEECCCCCCCCCCCCCCC GGAPAAGGAVAAGATDMCAAPLTDMSGVPMAVPGPVPLGAPVPVPLGAPLPLGAPVPLAP CCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVPVVPAGAPLIALGGPAAAGAPVEAAAPLIDMSGVKDAPTGPAPTGGPVPGQPVRPGPS CCCCCCCCCCEEEECCCCCCCCCCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC GAS CCC >Mature Secondary Structure TLMAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQGQSGEVAPAAGGPVA HHHHEEHHCCEEEEECCCCCCEEEEECCCCCCCCEEECCCEEEECCCCCCCCCCCCCCC GGAPAAGGAVAAGATDMCAAPLTDMSGVPMAVPGPVPLGAPVPVPLGAPLPLGAPVPLAP CCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVPVVPAGAPLIALGGPAAAGAPVEAAAPLIDMSGVKDAPTGPAPTGGPVPGQPVRPGPS CCCCCCCCCCEEEECCCCCCCCCCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC GAS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA