| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409905
Identifier: 41409905
GI number: 41409905
Start: 4254719
End: 4255408
Strand: Direct
Name: 41409905
Synonym: MAP3807
Alternate gene names: NA
Gene position: 4254719-4255408 (Clockwise)
Preceding gene: 41409904
Following gene: 41409909
Centisome position: 88.09
GC content: 73.19
Gene sequence:
>690_bases GTGGCAGGATTGCCGCTCATGGCAGGAAGCTGGGGCACCGTGCTGACCGGGCTGGTGCCGCTGGGGCTGGTCATCTCGTT GTCGCCGCTCACCGTCATCCCGGCGGTGCTGGTGCTGCAGGCGCCGCGGCCGCGGCCGAGCAGCCTGGCGTTCCTGGGCG GCTGGCTGCTGAGCCTGGCCGCGCTGACCGCGCTCGCCGTCGCGGCCTCGCACCTGCTCGGCGGCCTGGACAGGTCGCCG CCGCGGTGGTCGTCGTGGCTGCGGGTGGTGTTGGGGGCGGGGCTGATCGGCTACGGCATTTTCCGGTGGCACACCCGGCA CCGGCACAGCGAGTCGCCGGCCTGGATGCGGTCATTCGCCAGCATCACCCCGGCCCGCGCCGGCATCACCGGGGCGGTGC TCGCGGTGGTGCGCCCGGATGTGGCGCTCATCTGCGTCCCGGCCGGATTGGCCATCGGCAGCAGCGGACTCGGCCCGATC GGCGACTGGATGGCCGCGCTGTTCTTCGTCGCGGTCGCGGCGTCCAGCGTCGCGATCCCGATACTGGCCTATCTGGCGGC CGGCAGCCGCCTCGACGATGCGCTGGCCCGGCTCCGGGACTGGATGGACCGCAACAACGCCGCCCTGCTCGCGGCGGTCC TGGTGGTGATCGGCGCGATGGTGCTCTACCACGGGATCGACGCCCTGTAG
Upstream 100 bases:
>100_bases GCTGGCGGTCATCCTGCTGCTGATCGGGTTGATCGTGCTCTACAACGGGATTCGCGCGCTGGCCTGACCCGGCGCGTTTC GGCGTCACATCGGCGCCGCG
Downstream 100 bases:
>100_bases CCCCCGTCGCACAATCCCGCGTCCTCCTCGAATCGGTTGACCACCCGAAAAACCAACTCGCGGAACAACTCCCGGCCGTA GCCGGTGAGCATGCCGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MAGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALAVAASHLLGGLDRSP PRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFASITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPI GDWMAALFFVAVAASSVAIPILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL
Sequences:
>Translated_229_residues MAGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALAVAASHLLGGLDRSP PRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFASITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPI GDWMAALFFVAVAASSVAIPILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL >Mature_228_residues AGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALAVAASHLLGGLDRSPP RWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFASITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIG DWMAALFFVAVAASSVAIPILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23743; Mature: 23612
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLA CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ALTALAVAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIP HCCCHHCCHHHHHHHHHCCCEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLA CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ALTALAVAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIP HCCCHHCCHHHHHHHHHCCCEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA