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The map label for this gene is eccE3 [H]

Identifier: 41409886

GI number: 41409886

Start: 4235450

End: 4236172

Strand: Direct

Name: eccE3 [H]

Synonym: MAP3788

Alternate gene names: 41409886

Gene position: 4235450-4236172 (Clockwise)

Preceding gene: 41409885

Following gene: 41409888

Centisome position: 87.69

GC content: 73.72

Gene sequence:

>723_bases
GTGCGCCCGCCGAACGGCTCCGACGCGCTGCCGCTGCCGCTGATCGCCGGCTACCTGGACCGCTACGGCATCCGTGCGGA
CAAGGTCCGAATCACCAGCCGCGACAACGCCTCCGACGAGTCCCGGCGCCAAACCTGGATCGGGCTCACCGTGTCGGCGC
CGGACAACCTGGCCGCACTGCAGGCGCGCTCGCCGCGCATCCCGCTGGCCGAGACCGCGCAGGTCGCCGCCCGCCGGCTG
GCCGACCACCTGCGGGAGACCGGCTGGGAGGCCGGTGTTGTCCCGCCCGACGACGTCCCCCGCCTGTTGACGTCCAACCC
GCGCGAGAGATGGCGCGGGGTGCAGCGCGGCCCGTCGGATTACCTTGCCGCATACCAGATCCCGGTGGACGAGTCGCTGC
CGGAGACGTTGGAGGCGATCCGCTCGTACCCGGCGCGCCAAAGCTGCGTCGCGCTGGAGATCGCCGGGGACAAGGCGGCG
CCGACGATCGCCGTGGCATGCGCGTTCCAGACCGACACCGCCCCGGACCGCGGGGCGCCGCTGGCCGGGCTGATCCCGCA
ACGCGGCAACCATCTGCCCGCGCTGACCGCCCTGGACCTGTTGTCGACAGGGCGGCTGGACGGGCACACCGCGGCGACCG
CGGACCTGCTCGACCGGCTGCACTGGCCCACCCAAGGAGCGCCGGCCGGTGACGCCGACACCGTCGCCGCCGCTAGAACA
TGA

Upstream 100 bases:

>100_bases
TTCACCACCCTGCTGCGCCGCCGGCTGGCGATGATCGGGCGGCACAATGCGGTGCGCCCGCAGCGTCCCGACCCGGCCAC
CACCGTCCTGATCCGCGTCG

Downstream 100 bases:

>100_bases
CCTGCTGCAGGAACGCGGTCATCCGGCGCAGGTAGTCCAGCTGGCTGATGTGCAGCACATGGCTGCCCGGAAACCAGTGC
AGCGCACAACGATCCCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component E3; Type VII secretion system protein EccE3; T7SS protein EccE3 [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRPPNGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSAPDNLAALQARSPRIPLAETAQVAARRL
ADHLRETGWEAGVVPPDDVPRLLTSNPRERWRGVQRGPSDYLAAYQIPVDESLPETLEAIRSYPARQSCVALEIAGDKAA
PTIAVACAFQTDTAPDRGAPLAGLIPQRGNHLPALTALDLLSTGRLDGHTAATADLLDRLHWPTQGAPAGDADTVAAART

Sequences:

>Translated_240_residues
MRPPNGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSAPDNLAALQARSPRIPLAETAQVAARRL
ADHLRETGWEAGVVPPDDVPRLLTSNPRERWRGVQRGPSDYLAAYQIPVDESLPETLEAIRSYPARQSCVALEIAGDKAA
PTIAVACAFQTDTAPDRGAPLAGLIPQRGNHLPALTALDLLSTGRLDGHTAATADLLDRLHWPTQGAPAGDADTVAAART
>Mature_240_residues
MRPPNGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSAPDNLAALQARSPRIPLAETAQVAARRL
ADHLRETGWEAGVVPPDDVPRLLTSNPRERWRGVQRGPSDYLAAYQIPVDESLPETLEAIRSYPARQSCVALEIAGDKAA
PTIAVACAFQTDTAPDRGAPLAGLIPQRGNHLPALTALDLLSTGRLDGHTAATADLLDRLHWPTQGAPAGDADTVAAART

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EccE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021368 [H]

Pfam domain/function: PF11203 DUF2984 [H]

EC number: NA

Molecular weight: Translated: 25667; Mature: 25667

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPNGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSAPDNLAAL
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCEEEEEEEEECCCCHHHH
QARSPRIPLAETAQVAARRLADHLRETGWEAGVVPPDDVPRLLTSNPRERWRGVQRGPSD
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCC
YLAAYQIPVDESLPETLEAIRSYPARQSCVALEIAGDKAAPTIAVACAFQTDTAPDRGAP
CEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCC
LAGLIPQRGNHLPALTALDLLSTGRLDGHTAATADLLDRLHWPTQGAPAGDADTVAAART
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRPPNGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSAPDNLAAL
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCEEEEEEEEECCCCHHHH
QARSPRIPLAETAQVAARRLADHLRETGWEAGVVPPDDVPRLLTSNPRERWRGVQRGPSD
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCC
YLAAYQIPVDESLPETLEAIRSYPARQSCVALEIAGDKAAPTIAVACAFQTDTAPDRGAP
CEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCC
LAGLIPQRGNHLPALTALDLLSTGRLDGHTAATADLLDRLHWPTQGAPAGDADTVAAART
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]