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The map label for this gene is ppe4 [H]

Identifier: 41409880

GI number: 41409880

Start: 4229204

End: 4230685

Strand: Direct

Name: ppe4 [H]

Synonym: MAP3782

Alternate gene names: 41409880

Gene position: 4229204-4230685 (Clockwise)

Preceding gene: 41409879

Following gene: 41409881

Centisome position: 87.57

GC content: 73.14

Gene sequence:

>1482_bases
ATGACCTCCCCGTTCGGACCGATCTGGATGGCTTCGCCGCCCGAGGTGCATTCGGCGTTGCTCAGCGCCGGTCCGGGCTC
GGGGCCGCTGCTGGCGGCCGCCGGTGCCTGGGCCTCGCTGAGCGCCCAATACGCCACGGCGGCAGCCGAACTCAGCGCAC
TGCTGGGCCAGGTGCAGGCCGGGTCCTGGGAAGGGGAGAGTGCCGAGCAGTACGCGGCGGCGCACCTGCCGTATCTGGCG
TGGCTGCAGCAGGCCAGCGCCGACAGCGCGGGGGCCGCGGCGCAGCAGGAGGTCGCCGCCACAGCCTACACGACCGCGCT
GGCGGCCATGCCGACGCTGGCCGAACTGGCCGCCAACCACACCATCCACGGGGTGCTGCTGGCGACGAATTTCTTTGGCA
TCAACACCATTCCGATCGCCGTGAACGAAGCCGACTACGCCCGGATGTGGGTGCAGGCGGCCACCACGATGGGCACCTAT
CAGGCCGTCGCCGGCTCGGCGCTGGCCGCGGCACCGCGCACCGCCCCGGCGCCGTCCATCGTCAAACCCGGCGGGGAAGC
CAACAACCTCGCGGCCAACGCGGCCCAGAACAGCTCCGGGGATTGGTGGCAGAACTTCATCCAGCAGCTGTCCCAGTTCT
TCCAGAACATCCAGAAGATGCTGCAGGACTTCTGGGCGAATCTGCCGGCGTTCCTGGCGGCCAACGGACCCCTGCTGTTC
TTCGTCGCCTACCAGGTGTTCTTCAACGCGGTGGGCTGGCCGACCTGGGGTGCGATCCTGACCGCGCCGTTCCTGCTGCC
GCTGCTGCTGGGCATCGGCCTGAGCTCGCTGCTGGCCGCGCCCGCCGAGATCGCGCCCGTCGCCGCCCCCGCCGCGATCA
CCCCGGTGCTGGCGTCGAACAAGCCGCCCACGTTGCCGGCGGCGGTGGCGCTGGCCCCGAGCGTCGCCACCCCGGCCGGG
GCCCCGGCCAGCACGGTCGCCGCCGGCTCCGGCGCGTCGGCCGCCCCCGCGCCGGCCGCCGCGGCGGGAAACTTCGCCTA
TCTGGTCGCCTTCGGCGGCGACCCGGACACCGGAGTGGGCCCCACCCTGAGCGGGCGCGGCGGGGCCAAGGCCCCGGCGG
CGACCATCCCGGCGGCCGGTGCGGCCGCGCCGGCCCGCGCCGAGGCGCGAGCGCGACGCCGGCGGCGGGCCGCACTGCAC
GACTACAGCGACGAATTCCTGGACATGGACTCCGGTTTCGGTGTCCCCCCGGATTACGGCGCCGAGGAGGAGCTGGCCGC
GGCGGTGGCCTCCGGGCAGGGCGCCGGGACGCTCGGGTTCGCCGGAACCCAGCAGCGGCGCAAGGCCTTTCAAGCGGCCG
GACTGACCAAGCTGGCCGACGACGACTTCGGCGGCAGCCCACGGATGCCCATGGTGCCCGGCACCTGGGAGCAGGACACA
CAGAACGGAGCTCATCCGACCGAGCCGGGGAAAGGGGGGTAA

Upstream 100 bases:

>100_bases
GCTGGGCCGGGCAGGGGTCGGTGTCGGCCAGGCCGGCGCGAGCTATCTCGCCGGCGACACGGCGGCCGCTGCGACGTTCG
GGATCGCGGGCGCCTGACAC

Downstream 100 bases:

>100_bases
GGCAGTCAGCCAGATGCAGGTGAATTACCGAAACCCCAACGGACGCAACAGAAAGGAAGCACCATGAGCATGTTGGACGC
TCACATTCCGCAGTTGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTSPFGPIWMASPPEVHSALLSAGPGSGPLLAAAGAWASLSAQYATAAAELSALLGQVQAGSWEGESAEQYAAAHLPYLA
WLQQASADSAGAAAQQEVAATAYTTALAAMPTLAELAANHTIHGVLLATNFFGINTIPIAVNEADYARMWVQAATTMGTY
QAVAGSALAAAPRTAPAPSIVKPGGEANNLAANAAQNSSGDWWQNFIQQLSQFFQNIQKMLQDFWANLPAFLAANGPLLF
FVAYQVFFNAVGWPTWGAILTAPFLLPLLLGIGLSSLLAAPAEIAPVAAPAAITPVLASNKPPTLPAAVALAPSVATPAG
APASTVAAGSGASAAPAPAAAAGNFAYLVAFGGDPDTGVGPTLSGRGGAKAPAATIPAAGAAAPARAEARARRRRRAALH
DYSDEFLDMDSGFGVPPDYGAEEELAAAVASGQGAGTLGFAGTQQRRKAFQAAGLTKLADDDFGGSPRMPMVPGTWEQDT
QNGAHPTEPGKGG

Sequences:

>Translated_493_residues
MTSPFGPIWMASPPEVHSALLSAGPGSGPLLAAAGAWASLSAQYATAAAELSALLGQVQAGSWEGESAEQYAAAHLPYLA
WLQQASADSAGAAAQQEVAATAYTTALAAMPTLAELAANHTIHGVLLATNFFGINTIPIAVNEADYARMWVQAATTMGTY
QAVAGSALAAAPRTAPAPSIVKPGGEANNLAANAAQNSSGDWWQNFIQQLSQFFQNIQKMLQDFWANLPAFLAANGPLLF
FVAYQVFFNAVGWPTWGAILTAPFLLPLLLGIGLSSLLAAPAEIAPVAAPAAITPVLASNKPPTLPAAVALAPSVATPAG
APASTVAAGSGASAAPAPAAAAGNFAYLVAFGGDPDTGVGPTLSGRGGAKAPAATIPAAGAAAPARAEARARRRRRAALH
DYSDEFLDMDSGFGVPPDYGAEEELAAAVASGQGAGTLGFAGTQQRRKAFQAAGLTKLADDDFGGSPRMPMVPGTWEQDT
QNGAHPTEPGKGG
>Mature_492_residues
TSPFGPIWMASPPEVHSALLSAGPGSGPLLAAAGAWASLSAQYATAAAELSALLGQVQAGSWEGESAEQYAAAHLPYLAW
LQQASADSAGAAAQQEVAATAYTTALAAMPTLAELAANHTIHGVLLATNFFGINTIPIAVNEADYARMWVQAATTMGTYQ
AVAGSALAAAPRTAPAPSIVKPGGEANNLAANAAQNSSGDWWQNFIQQLSQFFQNIQKMLQDFWANLPAFLAANGPLLFF
VAYQVFFNAVGWPTWGAILTAPFLLPLLLGIGLSSLLAAPAEIAPVAAPAAITPVLASNKPPTLPAAVALAPSVATPAGA
PASTVAAGSGASAAPAPAAAAGNFAYLVAFGGDPDTGVGPTLSGRGGAKAPAATIPAAGAAAPARAEARARRRRRAALHD
YSDEFLDMDSGFGVPPDYGAEEELAAAVASGQGAGTLGFAGTQQRRKAFQAAGLTKLADDDFGGSPRMPMVPGTWEQDTQ
NGAHPTEPGKGG

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000030 [H]

Pfam domain/function: PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 49673; Mature: 49542

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPFGPIWMASPPEVHSALLSAGPGSGPLLAAAGAWASLSAQYATAAAELSALLGQVQA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
GSWEGESAEQYAAAHLPYLAWLQQASADSAGAAAQQEVAATAYTTALAAMPTLAELAANH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TIHGVLLATNFFGINTIPIAVNEADYARMWVQAATTMGTYQAVAGSALAAAPRTAPAPSI
CEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC
VKPGGEANNLAANAAQNSSGDWWQNFIQQLSQFFQNIQKMLQDFWANLPAFLAANGPLLF
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH
FVAYQVFFNAVGWPTWGAILTAPFLLPLLLGIGLSSLLAAPAEIAPVAAPAAITPVLASN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHCCCCCCHHHHHHHCCC
KPPTLPAAVALAPSVATPAGAPASTVAAGSGASAAPAPAAAAGNFAYLVAFGGDPDTGVG
CCCCCCHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PTLSGRGGAKAPAATIPAAGAAAPARAEARARRRRRAALHDYSDEFLDMDSGFGVPPDYG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
AEEELAAAVASGQGAGTLGFAGTQQRRKAFQAAGLTKLADDDFGGSPRMPMVPGTWEQDT
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
QNGAHPTEPGKGG
CCCCCCCCCCCCC
>Mature Secondary Structure 
TSPFGPIWMASPPEVHSALLSAGPGSGPLLAAAGAWASLSAQYATAAAELSALLGQVQA
CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
GSWEGESAEQYAAAHLPYLAWLQQASADSAGAAAQQEVAATAYTTALAAMPTLAELAANH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TIHGVLLATNFFGINTIPIAVNEADYARMWVQAATTMGTYQAVAGSALAAAPRTAPAPSI
CEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC
VKPGGEANNLAANAAQNSSGDWWQNFIQQLSQFFQNIQKMLQDFWANLPAFLAANGPLLF
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH
FVAYQVFFNAVGWPTWGAILTAPFLLPLLLGIGLSSLLAAPAEIAPVAAPAAITPVLASN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHCCCCCCHHHHHHHCCC
KPPTLPAAVALAPSVATPAGAPASTVAAGSGASAAPAPAAAAGNFAYLVAFGGDPDTGVG
CCCCCCHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PTLSGRGGAKAPAATIPAAGAAAPARAEARARRRRRAALHDYSDEFLDMDSGFGVPPDYG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
AEEELAAAVASGQGAGTLGFAGTQQRRKAFQAAGLTKLADDDFGGSPRMPMVPGTWEQDT
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
QNGAHPTEPGKGG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]