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The map label for this gene is csoR [H]

Identifier: 41409844

GI number: 41409844

Start: 4181143

End: 4181457

Strand: Direct

Name: csoR [H]

Synonym: MAP3746

Alternate gene names: 41409844

Gene position: 4181143-4181457 (Clockwise)

Preceding gene: 41409843

Following gene: 41409847

Centisome position: 86.57

GC content: 57.14

Gene sequence:

>315_bases
ATGACAAGGACACCCGAAAGCCAGCAGGAAAGCGACTATGGATATGTAGCCCACAAGGACGGCTACGCCAAGCGATTGCG
CAGAGTCGAGGGGCAGATCCGCGGTATTGCGAAGATGATCGAAGAGGACAAATACTGCATCGACGTCCTGACCCAGATCA
GTGCCGCCAACAATGCCCTACGTTCAGTAGCACTGAATCTGCTTGACGAGCACCTTGATCATTGCGTGAGTTCTGCACTC
GCTGAGGGTGGCGACGAGGCACAGGCGAAACTCTCCGAAGCCTCGGCCGCGATCGCTCGGCTTGTCCGCTCCTGA

Upstream 100 bases:

>100_bases
GGGATTCTCACTTCGGCCCCGGCCGCGACCCAATAGCAACGACTGCAAATGCGGCGGTCCAATATCGTCACCGAGTTGCA
GGAGAGCGAGGTTGAGCCCG

Downstream 100 bases:

>100_bases
TCGCGGCCCCGAATTCTTTGGGGGCGGTCAACCCCCGAGCGTATCGCTAATGACACGGAAAATGCTTGACCCGATATACC
CTACGGGGGTAGTGTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTRTPESQQESDYGYVAHKDGYAKRLRRVEGQIRGIAKMIEEDKYCIDVLTQISAANNALRSVALNLLDEHLDHCVSSAL
AEGGDEAQAKLSEASAAIARLVRS

Sequences:

>Translated_104_residues
MTRTPESQQESDYGYVAHKDGYAKRLRRVEGQIRGIAKMIEEDKYCIDVLTQISAANNALRSVALNLLDEHLDHCVSSAL
AEGGDEAQAKLSEASAAIARLVRS
>Mature_103_residues
TRTPESQQESDYGYVAHKDGYAKRLRRVEGQIRGIAKMIEEDKYCIDVLTQISAANNALRSVALNLLDEHLDHCVSSALA
EGGDEAQAKLSEASAAIARLVRS

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11390; Mature: 11259

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTPESQQESDYGYVAHKDGYAKRLRRVEGQIRGIAKMIEEDKYCIDVLTQISAANNAL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RSVALNLLDEHLDHCVSSALAEGGDEAQAKLSEASAAIARLVRS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TRTPESQQESDYGYVAHKDGYAKRLRRVEGQIRGIAKMIEEDKYCIDVLTQISAANNAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RSVALNLLDEHLDHCVSSALAEGGDEAQAKLSEASAAIARLVRS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]