| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409842
Identifier: 41409842
GI number: 41409842
Start: 4179295
End: 4180329
Strand: Direct
Name: 41409842
Synonym: MAP3744
Alternate gene names: NA
Gene position: 4179295-4180329 (Clockwise)
Preceding gene: 41409841
Following gene: 41409843
Centisome position: 86.53
GC content: 63.86
Gene sequence:
>1035_bases GTGACCACTCGGCCGCACCGTCCTCGGGCGATCGTGGTGGGTTCGACATTCGGCGCCGTGTACGCCGAAGCGCTGGCGGC GCCGGAATCGCCGGTGGAACTCGTCGGATTGTTGTCGACCGGGTCTCGGCAATCCGCCGATCTAGCCTCGCGCCTTGCCA TTCCGCTCTATACCGGCATGAACAGCCTCCCGCGCGTCGACATCGCGTTTGTGGTGGTGCGGTCAGGAGTTGTCGGCGGT GAGGGAACACGAGTGTGCAAGGAGTTGCTCTCACGCGGCGTGCATGTGGTCCAAGAGCAGCCCGTTCACGCTGACGAGAT TATGTCCCTGCTCCACGTGGCCGCGGAAAATGCGGTTCTCTACACGGTGAACGACTTCTACAGCCGGGTCGCGCCGATGC GCCAATTTATCTGTGCGGCCAAGACTCTCGATAGCCTGGCGCGTATCAGGTACGTTCATGCACGGGCATCGCTGCACGTT GTCTACCCCTTATTCACCATTCTGGCGAGCATCGTCGGCCCGCTGACCCCGGCCCGGATCGTCATGCCGGAACAGACCGG AGGCGCCTTCGTCGCCGGCCGGATTGTGCTCGCCGACGTCCCTGTCGACCTGCTGATCCAAAATGAGTTGTGCGCCAGCG AACCAGACAACTACGCACGGTTGTTGCACACCCTCACGGTAGGGTCCGACGCCGGCGAACTCGTCCTCGACCACACCCAC GGGCCAACACGGTGGCATCCGCGTCCGTACCCCGATAGCTGGGCGTCGCAGTCCGGCTGTCCTATCTCCGAACGTGTCGG TATCGACTTTGACCCGACGACGGCGACGGTGCGCAACGAACTCTGGCCCGACGCGGTCCGGTTGGCCGCCTCCGAATTTC TCGGATCGATCGGCCGCGTGCGCGCAGGGGTTACGCAACGATTCGTCCGGGCCACCCGGCTGTGGTCCGAATTTACGTCG GCGATGGGGCCTGCCGCACCGATCAATCCGGTGACATCGGCAAGGCTTTCGGCCTCGGAGCTGGTTGCCTTATGA
Upstream 100 bases:
>100_bases GTTCCTGGCCGCGACCGTACCGTGACTTTGCGGTATCATTCGCGGGCGATGCCTCGCCCGTCCCGCATAGCGCGCTGTCG GCGGCCGAGGAGGGTTCACT
Downstream 100 bases:
>100_bases CCGTGCGTATCGGAGCACTGACCGAACCGACACCCGGCAACCGCACCGTCGTCGTCTTCCCGCACGCGGGCGCCAGCCCG CGCTTCTACGCTTCCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Siderophore-Like Synthase Protein; Oxidoreductase; Pyochelin Biosynthetic Protein; Reductase Component; Siderophore Biosynthetic Protein; Thiazolinyl-S-HMWP1 Reductase YbtU; Thiazoline Reductase; Yersiniabactin Synthetase Thiazolinyl Reductase Component; Oxidoreductase Domain Protein; Oxidoreductase/Methylase; Pyochelin Biosynthetic Protein PchG; Polyketide Synthase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTTRPHRPRAIVVGSTFGAVYAEALAAPESPVELVGLLSTGSRQSADLASRLAIPLYTGMNSLPRVDIAFVVVRSGVVGG EGTRVCKELLSRGVHVVQEQPVHADEIMSLLHVAAENAVLYTVNDFYSRVAPMRQFICAAKTLDSLARIRYVHARASLHV VYPLFTILASIVGPLTPARIVMPEQTGGAFVAGRIVLADVPVDLLIQNELCASEPDNYARLLHTLTVGSDAGELVLDHTH GPTRWHPRPYPDSWASQSGCPISERVGIDFDPTTATVRNELWPDAVRLAASEFLGSIGRVRAGVTQRFVRATRLWSEFTS AMGPAAPINPVTSARLSASELVAL
Sequences:
>Translated_344_residues MTTRPHRPRAIVVGSTFGAVYAEALAAPESPVELVGLLSTGSRQSADLASRLAIPLYTGMNSLPRVDIAFVVVRSGVVGG EGTRVCKELLSRGVHVVQEQPVHADEIMSLLHVAAENAVLYTVNDFYSRVAPMRQFICAAKTLDSLARIRYVHARASLHV VYPLFTILASIVGPLTPARIVMPEQTGGAFVAGRIVLADVPVDLLIQNELCASEPDNYARLLHTLTVGSDAGELVLDHTH GPTRWHPRPYPDSWASQSGCPISERVGIDFDPTTATVRNELWPDAVRLAASEFLGSIGRVRAGVTQRFVRATRLWSEFTS AMGPAAPINPVTSARLSASELVAL >Mature_343_residues TTRPHRPRAIVVGSTFGAVYAEALAAPESPVELVGLLSTGSRQSADLASRLAIPLYTGMNSLPRVDIAFVVVRSGVVGGE GTRVCKELLSRGVHVVQEQPVHADEIMSLLHVAAENAVLYTVNDFYSRVAPMRQFICAAKTLDSLARIRYVHARASLHVV YPLFTILASIVGPLTPARIVMPEQTGGAFVAGRIVLADVPVDLLIQNELCASEPDNYARLLHTLTVGSDAGELVLDHTHG PTRWHPRPYPDSWASQSGCPISERVGIDFDPTTATVRNELWPDAVRLAASEFLGSIGRVRAGVTQRFVRATRLWSEFTSA MGPAAPINPVTSARLSASELVAL
Specific function: Unknown
COG id: COG4693
COG function: function code Q; Oxidoreductase (NAD-binding), involved in siderophore biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37028; Mature: 36897
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRPHRPRAIVVGSTFGAVYAEALAAPESPVELVGLLSTGSRQSADLASRLAIPLYTGM CCCCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHCC NSLPRVDIAFVVVRSGVVGGEGTRVCKELLSRGVHVVQEQPVHADEIMSLLHVAAENAVL CCCCCHHHHHEEECCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCEEE YTVNDFYSRVAPMRQFICAAKTLDSLARIRYVHARASLHVVYPLFTILASIVGPLTPARI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VMPEQTGGAFVAGRIVLADVPVDLLIQNELCASEPDNYARLLHTLTVGSDAGELVLDHTH EEECCCCCEEEEEEEEEEECCHHEEEECCHHCCCCHHHHHHHHHHHCCCCCCCEEEECCC GPTRWHPRPYPDSWASQSGCPISERVGIDFDPTTATVRNELWPDAVRLAASEFLGSIGRV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH RAGVTQRFVRATRLWSEFTSAMGPAAPINPVTSARLSASELVAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCC >Mature Secondary Structure TTRPHRPRAIVVGSTFGAVYAEALAAPESPVELVGLLSTGSRQSADLASRLAIPLYTGM CCCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHCC NSLPRVDIAFVVVRSGVVGGEGTRVCKELLSRGVHVVQEQPVHADEIMSLLHVAAENAVL CCCCCHHHHHEEECCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCEEE YTVNDFYSRVAPMRQFICAAKTLDSLARIRYVHARASLHVVYPLFTILASIVGPLTPARI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VMPEQTGGAFVAGRIVLADVPVDLLIQNELCASEPDNYARLLHTLTVGSDAGELVLDHTH EEECCCCCEEEEEEEEEEECCHHEEEECCHHCCCCHHHHHHHHHHHCCCCCCCEEEECCC GPTRWHPRPYPDSWASQSGCPISERVGIDFDPTTATVRNELWPDAVRLAASEFLGSIGRV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH RAGVTQRFVRATRLWSEFTSAMGPAAPINPVTSARLSASELVAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA