| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409820
Identifier: 41409820
GI number: 41409820
Start: 4142007
End: 4143152
Strand: Direct
Name: 41409820
Synonym: MAP3722
Alternate gene names: NA
Gene position: 4142007-4143152 (Clockwise)
Preceding gene: 41409819
Following gene: 41409822
Centisome position: 85.76
GC content: 74.0
Gene sequence:
>1146_bases GTGCTCCCCCTTGGAGATCGTCGCGCCGCCGCGGGAGCGCGAGGACATCGACGCGTGGCTCGACGAGCAGACCCACAAGC GGCCGGACGCCGAGCGCGGGCCCGGATGGCACTTGGCGATGCTCCCGCTGACCGACGGCGGCGCGGTGGTGAGCCTGGTC ACCACGCACTGCCTCACCGATGGCGTCGGGCTGTGCGAGGCCCTGGCCGACGCGGCTCGGGGACGCGGCGACCGGACCCG CTGGCCCGCCGCGGGAGGTCGGCGGCGCTGGCAAGCCCTGCGCGAGGACGCGCGCCAAACCGCGCACGACGCGCTCGATG TCGGCCGCGCCGTCGGTGCCGCGGCCCGGATGCTCCGGCAGGGCCGCGACGGCACCGCGTCCGTCGCCCCGCCACGCGGG AAGCGGCCCGCGCCGCCGGCCGCGCCCGACGACCGCATTGCCCTGCCGATGGAGACGATCTTCGTCAGCGCCGACGACTG GGACGCGCGCGCAACCGCCTTGGGCGGCACCAGCAACGCGCTGCTCGCCGGGTTGGCGGGCCACCTCGCCCAGCGGGTGG GGCGGGTGGCCCCCGACGGCTCGGTCAACATCGGCATGCCCGTCAACGAGCGCGCCCCAAGCGACACGCGCGCCAACGCG GTCACGAACGTCGACGTCACGCTGGGGTCCGCGGCGATCACCACGGACCTGCGCGAGATCCGCGCCGCCATCAAGCGGGC GCTGGTTCGCCATCACGACGAGCCCGACGAGCGGTGGGCGCTGCTGCCCCTCGTCCCGCTGATCCCGAAGCCGGTGTTTC GGCGGTTGCTCAGCGTGGTCACCGGCGGCGCGGCGACCGTGGTGTCGTCCAATCTCGGCGCGCTCGACCCGGCCGCCAAC CGGCCGGACGGCACGGACGCCGACTACTTCGCCATGAAGTCGGTGTACCCGGGCGTGACCGCCGCGACGATGCACCGCAC CAACGGGGCCCTGGCGTTGCTGTCGGGGCGGGTCCACGGCCGGGTCTTCATCTCGGTCCTCGCCTACGAATTGGGCCGCC ACAATTCGAACGAGGGTCTGCGACAAGCGCTTTCCAAGACGCTGAGCGACTTCTCGCTGGCCGCCACAACGGGCTGGCAC ACGGTCTGCCCCGTGTGAGGCGCTAG
Upstream 100 bases:
>100_bases TGCGTGAGTTCCACCGCCACCTCGGGCGGGGGCGGCTGTCACGGCGAGTCGAGCGCTCCGCCTTGCCGTTTGGCCGTCAT CGCTGGGTGGCGGCCGCCGA
Downstream 100 bases:
>100_bases GCCTCGGCCCGTGTTTCGGTGAGCCGGTAGAGGTTTGGCTCGGCAAGCTCGTCGAGCAGGGCGGCCAGGTGATCGACGAG CTCATCCGGTTCGAGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHRWRRAVRGPGRRGSGTRRPDP LARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPAGPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRL GRARNRLGRHQQRAARRVGGPPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGRRLLRHEVGVPGRDRRDDAPH QRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQDAERLLAGRHNGLAHGLPRVRR
Sequences:
>Translated_381_residues MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHRWRRAVRGPGRRGSGTRRPDP LARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPAGPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRL GRARNRLGRHQQRAARRVGGPPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGRRLLRHEVGVPGRDRRDDAPH QRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQDAERLLAGRHNGLAHGLPRVRR >Mature_381_residues MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHRWRRAVRGPGRRGSGTRRPDP LARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPAGPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRL GRARNRLGRHQQRAARRVGGPPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGRRLLRHEVGVPGRDRRDDAPH QRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQDAERLLAGRHNGLAHGLPRVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41952; Mature: 41952
Theoretical pI: Translated: 12.95; Mature: 12.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHR CCCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHH WRRAVRGPGRRGSGTRRPDPLARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPA HHHHHCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCC GPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRLGRARNRLGRHQQRAARRVGG CCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGR CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH RLLRHEVGVPGRDRRDDAPHQRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQD HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH AERLLAGRHNGLAHGLPRVRR HHHHHHHCCCCHHHCCHHHCC >Mature Secondary Structure MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHR CCCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHH WRRAVRGPGRRGSGTRRPDPLARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPA HHHHHCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCC GPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRLGRARNRLGRHQQRAARRVGG CCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGR CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH RLLRHEVGVPGRDRRDDAPHQRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQD HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH AERLLAGRHNGLAHGLPRVRR HHHHHHHCCCCHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA