| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409817
Identifier: 41409817
GI number: 41409817
Start: 4138699
End: 4139322
Strand: Direct
Name: 41409817
Synonym: MAP3719
Alternate gene names: NA
Gene position: 4138699-4139322 (Clockwise)
Preceding gene: 41409813
Following gene: 41409818
Centisome position: 85.69
GC content: 65.71
Gene sequence:
>624_bases TTGGCCAGGCTCATCGAGCCGGGAACCGAGGGGAGCCGCACGATGATCAAGCCGCACAACACCAACGCGGAATTCGAACT CGGCGGGATCAATCACGTCGCGCTGGTGTGCTCGGACATGGCCAAAACCGTCGACTTCTACAGCAACATCCTGGGCATGC CGCTGATCAAGTCGCTCGATCTGCCCGGCGGGGCGGGCCAGCACTTCTTCTTCGACGCCGGCAACGGCGACTGCGTCGCC TTCTTCTGGTTCGCCGACGCCCCCGACCGGTTGCCGGGCATTTCGTCGCCGGGCGCCATCCCCGGCATCGGCGACATCAC CAGCGCGGTCAGCACGATGAACCACCTGGCTTTCCACGTGCCGGCCGAGAAGTTCGACGCCTACCGCCAGCGACTCAAGG ACAAAGGGGTGCGGGTCGGGCCGGTGCTCAACCACGATGAGAGCCCCATGCAGGTCTCGGCGACCGTGCATCCCGGCGTC TATGTGCGCTCGTTCTATTTCCAGGATCCCGACGGCATTACCCTCGAGTTCGCCTGTTGGGTGAAGGAATTCGAAAGCGG CGACGCGAAGGCCGTGCCCAAGACCGCCGCGGACCGCCGACCCCCGGTGGGCGCCGGTCGCTGA
Upstream 100 bases:
>100_bases CCGCGGGTGGCCCGCTCCGGTCAGCAGGGGATGCCGCGGTGGACACCTGCGCACCTCCCTGGGCCAAAACTGAATCTGAT GTTAGATTCAGATTCGGATC
Downstream 100 bases:
>100_bases TCGCGCCGCTGCTCCGCGAGTCGGAGAATGCTAGGTATGACCGACGGCATTTTGACCGACGAACAGATCGCCGCGCTTAC CCCCGGGCAGCGCCGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase Family Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MARLIEPGTEGSRTMIKPHNTNAEFELGGINHVALVCSDMAKTVDFYSNILGMPLIKSLDLPGGAGQHFFFDAGNGDCVA FFWFADAPDRLPGISSPGAIPGIGDITSAVSTMNHLAFHVPAEKFDAYRQRLKDKGVRVGPVLNHDESPMQVSATVHPGV YVRSFYFQDPDGITLEFACWVKEFESGDAKAVPKTAADRRPPVGAGR
Sequences:
>Translated_207_residues MARLIEPGTEGSRTMIKPHNTNAEFELGGINHVALVCSDMAKTVDFYSNILGMPLIKSLDLPGGAGQHFFFDAGNGDCVA FFWFADAPDRLPGISSPGAIPGIGDITSAVSTMNHLAFHVPAEKFDAYRQRLKDKGVRVGPVLNHDESPMQVSATVHPGV YVRSFYFQDPDGITLEFACWVKEFESGDAKAVPKTAADRRPPVGAGR >Mature_206_residues ARLIEPGTEGSRTMIKPHNTNAEFELGGINHVALVCSDMAKTVDFYSNILGMPLIKSLDLPGGAGQHFFFDAGNGDCVAF FWFADAPDRLPGISSPGAIPGIGDITSAVSTMNHLAFHVPAEKFDAYRQRLKDKGVRVGPVLNHDESPMQVSATVHPGVY VRSFYFQDPDGITLEFACWVKEFESGDAKAVPKTAADRRPPVGAGR
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22351; Mature: 22219
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLIEPGTEGSRTMIKPHNTNAEFELGGINHVALVCSDMAKTVDFYSNILGMPLIKSLD CCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC LPGGAGQHFFFDAGNGDCVAFFWFADAPDRLPGISSPGAIPGIGDITSAVSTMNHLAFHV CCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEC PAEKFDAYRQRLKDKGVRVGPVLNHDESPMQVSATVHPGVYVRSFYFQDPDGITLEFACW CHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEEEE VKEFESGDAKAVPKTAADRRPPVGAGR HHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARLIEPGTEGSRTMIKPHNTNAEFELGGINHVALVCSDMAKTVDFYSNILGMPLIKSLD CCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC LPGGAGQHFFFDAGNGDCVAFFWFADAPDRLPGISSPGAIPGIGDITSAVSTMNHLAFHV CCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEC PAEKFDAYRQRLKDKGVRVGPVLNHDESPMQVSATVHPGVYVRSFYFQDPDGITLEFACW CHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEEEE VKEFESGDAKAVPKTAADRRPPVGAGR HHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA