| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409813
Identifier: 41409813
GI number: 41409813
Start: 4133225
End: 4133611
Strand: Direct
Name: 41409813
Synonym: MAP3715
Alternate gene names: NA
Gene position: 4133225-4133611 (Clockwise)
Preceding gene: 41409812
Following gene: 41409817
Centisome position: 85.58
GC content: 74.16
Gene sequence:
>387_bases TTGATGGCCCGGGTGATCTGGGCGGTCAGCTTGGGGTCGACCAGCAGCTGGTCGATCAGCGCGGTGAGCACCTCCTGCCC GGTCACCCGGGCGACCCCCAGCCGGTCGGCGGCTTCGCGCTGCCAGATGTCGAGGGCCCGGTGGGTGGCCGCCGGCAGGT CCACGGTCCGGCGGGTGCGCTGGGTGCGGCCTGCCTGGTTGGCCGGCGGGGCGCTGGGCACCCGCGGGCCGCCGGGCTGG CGGATGCTGGTGAGGCGCTCGGTGGGCGCGGCGTCTCCGGAGGGGCCGGCGGCTTGGGTGGGAGCGCGAAACGCGCCGCC GCTGGGTCCGCTGTGGCTGGGGTTGAAGTTCACTGCGGTGTCTTCCTCCGTGAGTGCCAATCAGTAA
Upstream 100 bases:
>100_bases GGTGCCCCGCGAGGTCATTTTCCTCGACGAGTTGCCGCGCAACCCGACCGGCAAGATCCTCAAACGCGAGCTGCGCGAGA TGGAGGTCTAGCGGCGCTCT
Downstream 100 bases:
>100_bases ATCAGCGCTCGTTGCCTGTGTGTCAATACTGATTCTGTCACCGACGCCAGCCTAAGTCGCGTTGCCGGGCCGGGCATGTG GCGGGCCGGTGCGGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MMARVIWAVSLGSTSSWSISAVSTSCPVTRATPSRSAASRCQMSRARWVAAGRSTVRRVRWVRPAWLAGGALGTRGPPGW RMLVRRSVGAASPEGPAAWVGARNAPPLGPLWLGLKFTAVSSSVSANQ
Sequences:
>Translated_128_residues MMARVIWAVSLGSTSSWSISAVSTSCPVTRATPSRSAASRCQMSRARWVAAGRSTVRRVRWVRPAWLAGGALGTRGPPGW RMLVRRSVGAASPEGPAAWVGARNAPPLGPLWLGLKFTAVSSSVSANQ >Mature_128_residues MMARVIWAVSLGSTSSWSISAVSTSCPVTRATPSRSAASRCQMSRARWVAAGRSTVRRVRWVRPAWLAGGALGTRGPPGW RMLVRRSVGAASPEGPAAWVGARNAPPLGPLWLGLKFTAVSSSVSANQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13487; Mature: 13487
Theoretical pI: Translated: 12.98; Mature: 12.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMARVIWAVSLGSTSSWSISAVSTSCPVTRATPSRSAASRCQMSRARWVAAGRSTVRRVR CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WVRPAWLAGGALGTRGPPGWRMLVRRSVGAASPEGPAAWVGARNAPPLGPLWLGLKFTAV HCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEECEEEEEE SSSVSANQ CCCCCCCC >Mature Secondary Structure MMARVIWAVSLGSTSSWSISAVSTSCPVTRATPSRSAASRCQMSRARWVAAGRSTVRRVR CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WVRPAWLAGGALGTRGPPGWRMLVRRSVGAASPEGPAAWVGARNAPPLGPLWLGLKFTAV HCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEECEEEEEE SSSVSANQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA