| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409776
Identifier: 41409776
GI number: 41409776
Start: 4086787
End: 4087164
Strand: Direct
Name: 41409776
Synonym: MAP3678
Alternate gene names: NA
Gene position: 4086787-4087164 (Clockwise)
Preceding gene: 41409775
Following gene: 41409777
Centisome position: 84.62
GC content: 63.23
Gene sequence:
>378_bases GTGGATGCCATGCGCCGCGTGGACTACGTCATCCAATATGTCGAGTCACTGGAGCGGTCGGTGACGTTCTACCGGGACGT GATCGGGCTCGAGGTGCGCATCGAGGGCGACGGGTATGTCGAGTTCGAGATGCCCAACACCAAGTTCTCGCTTTTCGAAC GCTCCAAGCTTCCCGAGCTGATCGGTCGCGAGGGCGGCACCGCGCCGTGCGGCGAGATCGGTTTTCTGGTCGATGACGTG GACGAGGAAGCGACGCGGTTGCGGGGGCTCGGCGTCGAGATCCTCAGCGGACCGGTAGACCGGCCCTGGCGGGAAAGGAC GCTGCACATCGCCGATCCGGACGGCAACGTCATCGAATTCGCACAGAAGCTTCGATGA
Upstream 100 bases:
>100_bases AGCCTGCGCGACACCGAGGTGGTCACCGAAGTGTGGTGGGTTCTCGAGCTGGCGGCGATGCGCCTGTAGCGGTCCCGAGG ACGGGCCGCAAGCCGATACG
Downstream 100 bases:
>100_bases CGTCCCGGCCCGGGAACCGACGCGGCTTAGCGTTTGTAGCGGTTCCCAAACGGGTGCCCCGATGTCCGTGACAATCCCGG CGGCCGCTCCGTAGCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxylase Family Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MDAMRRVDYVIQYVESLERSVTFYRDVIGLEVRIEGDGYVEFEMPNTKFSLFERSKLPELIGREGGTAPCGEIGFLVDDV DEEATRLRGLGVEILSGPVDRPWRERTLHIADPDGNVIEFAQKLR
Sequences:
>Translated_125_residues MDAMRRVDYVIQYVESLERSVTFYRDVIGLEVRIEGDGYVEFEMPNTKFSLFERSKLPELIGREGGTAPCGEIGFLVDDV DEEATRLRGLGVEILSGPVDRPWRERTLHIADPDGNVIEFAQKLR >Mature_125_residues MDAMRRVDYVIQYVESLERSVTFYRDVIGLEVRIEGDGYVEFEMPNTKFSLFERSKLPELIGREGGTAPCGEIGFLVDDV DEEATRLRGLGVEILSGPVDRPWRERTLHIADPDGNVIEFAQKLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14264; Mature: 14264
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAMRRVDYVIQYVESLERSVTFYRDVIGLEVRIEGDGYVEFEMPNTKFSLFERSKLPEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCHHHHHHHHCCHHH IGREGGTAPCGEIGFLVDDVDEEATRLRGLGVEILSGPVDRPWRERTLHIADPDGNVIEF HCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHH AQKLR HHHCC >Mature Secondary Structure MDAMRRVDYVIQYVESLERSVTFYRDVIGLEVRIEGDGYVEFEMPNTKFSLFERSKLPEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCHHHHHHHHCCHHH IGREGGTAPCGEIGFLVDDVDEEATRLRGLGVEILSGPVDRPWRERTLHIADPDGNVIEF HCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHH AQKLR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA