| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409762
Identifier: 41409762
GI number: 41409762
Start: 4069772
End: 4070938
Strand: Direct
Name: 41409762
Synonym: MAP3664
Alternate gene names: NA
Gene position: 4069772-4070938 (Clockwise)
Preceding gene: 41409758
Following gene: 41409765
Centisome position: 84.26
GC content: 73.52
Gene sequence:
>1167_bases ATGTCTTCCTTGCGCTCCGTGCTGCTGCTGTGCTGGCGCGATACCGGGCACCCGCAGGGCGGCGGCAGCGAGGCCTATCT GCAGCGCATCGGCGCGCAGCTGGCCGCGGCCGGGATCGCGGTCACGTTGCGCACCGCCCGCTATCCCGGCGCGCCGCGCC GCGACGTCGTCGACGGCGTCCGGATCAGCCGGGCCGGCGGCCGCTACTCGGTGTACATCTGGGCGTTGCTGGCGATGGCG GTCGCCCGGCTGGGGCTGGGGCCGCTGCGCACGGTGCGGCCCGACGTGGTCGTCGACACCCAGAACGGCCTGCCGTTCCT GGCCCGGCTGATCTACGGCCGCCGGGTGGTGGTGCTGGTGCACCATTGCCACCGTGAGCAGTGGCCGGTGGCCGGGCCGG TGCTAGGCCGGCTGGGCTGGTTCGTCGAGTCGACGCTGTCGCCGCGGCTGAACCGGCGCAACCAGTACGTGACGGTGTCG CTGCCGTCGGCCCGCGACCTGGTGGCCCTGGGCGTCGACGGCACGCGGATCGCGGTGGTGCGCAACGGCCTGGACGAGGC GCCCGCGCCGTCGCTGTCCGGGCCCCGCGCCGCCGCGCCGCGGGTGGTCGTGCTGTCCCGGCTGGTGCCGCACAAGCAGA TCGAGGACGCGCTGGAGGCCGTCGCCCGGCTGCGGCCGCGGGTGCCGGGCCTGCATCTGGACATCGTCGGCGACGGCTGG TGGCGGCAGCGGCTGGTCGAGCACGTGCAACGGCTCGGCATCGGTTCGGCGGTGACGTTTCACGGTCACGTCGACGACGT GACGAAACACCATGTGCTGCAAGGGGCTTGGGTGCACCTGCTGCCGTCGCGCAAGGAGGGCTGGGGTCTGGCGGTGGTCG AGGCGGCCCAGCACCGGGTGCCGACCATCGGCTACCGCTCCTCGGGCGGCCTGTCGGACTCGATCGTCGACGAGGTGACC GGGATATTGGTGGACACCCATGCCGAGCTCGTGGACCGGCTCGAGCAGCTGCTCGCCGACCCGGTGCTGCGCGACCAGCT CGGCGCCAAGGCGCACACCCGCAGCGGCGAATTCTCTTGGGCGCAAAGCGCCGACGCGATGCGCGGCGTGCTGGAAGCGG TACACGCCGGCCGCACGGTCAGCGGCCTGGTCAGCGGGCGCGGCTGA
Upstream 100 bases:
>100_bases AGATGTCGGTCACGGCCACGGGGCAACCTTATGCAGGCTTATGCGGGCGCGACGCGCATGGCGCGGCCCGCGGCGCCCGT CCGGCTAGGCTGAACCACTG
Downstream 100 bases:
>100_bases CCCCGCGGCGCCGCCACGCACCGACCAGGACACCGGCCCCGCTGCCGAGCAGCAGCACCAGCCAGGCCAGATGCGCGATC AGCGTCGCCGCCCGGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Stealth protein SCO2592 [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSSLRSVLLLCWRDTGHPQGGGSEAYLQRIGAQLAAAGIAVTLRTARYPGAPRRDVVDGVRISRAGGRYSVYIWALLAMA VARLGLGPLRTVRPDVVVDTQNGLPFLARLIYGRRVVVLVHHCHREQWPVAGPVLGRLGWFVESTLSPRLNRRNQYVTVS LPSARDLVALGVDGTRIAVVRNGLDEAPAPSLSGPRAAAPRVVVLSRLVPHKQIEDALEAVARLRPRVPGLHLDIVGDGW WRQRLVEHVQRLGIGSAVTFHGHVDDVTKHHVLQGAWVHLLPSRKEGWGLAVVEAAQHRVPTIGYRSSGGLSDSIVDEVT GILVDTHAELVDRLEQLLADPVLRDQLGAKAHTRSGEFSWAQSADAMRGVLEAVHAGRTVSGLVSGRG
Sequences:
>Translated_388_residues MSSLRSVLLLCWRDTGHPQGGGSEAYLQRIGAQLAAAGIAVTLRTARYPGAPRRDVVDGVRISRAGGRYSVYIWALLAMA VARLGLGPLRTVRPDVVVDTQNGLPFLARLIYGRRVVVLVHHCHREQWPVAGPVLGRLGWFVESTLSPRLNRRNQYVTVS LPSARDLVALGVDGTRIAVVRNGLDEAPAPSLSGPRAAAPRVVVLSRLVPHKQIEDALEAVARLRPRVPGLHLDIVGDGW WRQRLVEHVQRLGIGSAVTFHGHVDDVTKHHVLQGAWVHLLPSRKEGWGLAVVEAAQHRVPTIGYRSSGGLSDSIVDEVT GILVDTHAELVDRLEQLLADPVLRDQLGAKAHTRSGEFSWAQSADAMRGVLEAVHAGRTVSGLVSGRG >Mature_387_residues SSLRSVLLLCWRDTGHPQGGGSEAYLQRIGAQLAAAGIAVTLRTARYPGAPRRDVVDGVRISRAGGRYSVYIWALLAMAV ARLGLGPLRTVRPDVVVDTQNGLPFLARLIYGRRVVVLVHHCHREQWPVAGPVLGRLGWFVESTLSPRLNRRNQYVTVSL PSARDLVALGVDGTRIAVVRNGLDEAPAPSLSGPRAAAPRVVVLSRLVPHKQIEDALEAVARLRPRVPGLHLDIVGDGWW RQRLVEHVQRLGIGSAVTFHGHVDDVTKHHVLQGAWVHLLPSRKEGWGLAVVEAAQHRVPTIGYRSSGGLSDSIVDEVTG ILVDTHAELVDRLEQLLADPVLRDQLGAKAHTRSGEFSWAQSADAMRGVLEAVHAGRTVSGLVSGRG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the stealth family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 42016; Mature: 41885
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLRSVLLLCWRDTGHPQGGGSEAYLQRIGAQLAAAGIAVTLRTARYPGAPRRDVVDGV CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHCCC RISRAGGRYSVYIWALLAMAVARLGLGPLRTVRPDVVVDTQNGLPFLARLIYGRRVVVLV EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEHE HHCHREQWPVAGPVLGRLGWFVESTLSPRLNRRNQYVTVSLPSARDLVALGVDGTRIAVV EHHCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCEEEECCCCCEEEEE RNGLDEAPAPSLSGPRAAAPRVVVLSRLVPHKQIEDALEAVARLRPRVPGLHLDIVGDGW ECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCH WRQRLVEHVQRLGIGSAVTFHGHVDDVTKHHVLQGAWVHLLPSRKEGWGLAVVEAAQHRV HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEECCCCCCCCCHHEEHHHHCCC PTIGYRSSGGLSDSIVDEVTGILVDTHAELVDRLEQLLADPVLRDQLGAKAHTRSGEFSW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCH AQSADAMRGVLEAVHAGRTVSGLVSGRG HHHHHHHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure SSLRSVLLLCWRDTGHPQGGGSEAYLQRIGAQLAAAGIAVTLRTARYPGAPRRDVVDGV CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHCCC RISRAGGRYSVYIWALLAMAVARLGLGPLRTVRPDVVVDTQNGLPFLARLIYGRRVVVLV EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEHE HHCHREQWPVAGPVLGRLGWFVESTLSPRLNRRNQYVTVSLPSARDLVALGVDGTRIAVV EHHCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCEEEECCCCCEEEEE RNGLDEAPAPSLSGPRAAAPRVVVLSRLVPHKQIEDALEAVARLRPRVPGLHLDIVGDGW ECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCH WRQRLVEHVQRLGIGSAVTFHGHVDDVTKHHVLQGAWVHLLPSRKEGWGLAVVEAAQHRV HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEECCCCCCCCCHHEEHHHHCCC PTIGYRSSGGLSDSIVDEVTGILVDTHAELVDRLEQLLADPVLRDQLGAKAHTRSGEFSW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCH AQSADAMRGVLEAVHAGRTVSGLVSGRG HHHHHHHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]