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The map label for this gene is csoR [H]

Identifier: 41409730

GI number: 41409730

Start: 4028657

End: 4028947

Strand: Direct

Name: csoR [H]

Synonym: MAP3632

Alternate gene names: 41409730

Gene position: 4028657-4028947 (Clockwise)

Preceding gene: 41409728

Following gene: 41409731

Centisome position: 83.41

GC content: 67.7

Gene sequence:

>291_bases
ATGACCAACGAACACGGGTACTCGCAGCAGAAGGACAACTACGCCAAGCGGCTGCGGCGCATCGAGGGCCAGGTGCGCGG
CATCGCCCGGATGATCGAGGAGGACAAGTACTGCATCGACGTCCTCACTCAGATCAGCGCCGTCAACAGCGCGCTGCGCT
CGGTCGCCCTGAATTTGCTCGACGAGCACCTGGGCCACTGCGTCACCCGTGCGGTGGCCGGCGGCGGCGACGACGCGGAC
GAGAAGCTCGCCGAGGCGTCCGCCGCCATCGCGCGCCTGGTTCGCTCCTGA

Upstream 100 bases:

>100_bases
TCGCGATACCAGCTCCCGGGGTTATACCGGGGCGGGGTATAAGCTGGGGCCGGGTGTGATGCCGCCGCGGGGCAGCCAGA
TCGGCAGGGGTGAAACGACG

Downstream 100 bases:

>100_bases
TCGCCCGGGCGTGTTGCCCGGCCAAGATGGATGAACCGGCGACCGGTATGCGTACGGTAGGGGAGCGCGATCTGGTTTGC
GGCATTGCTTAGCCGACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTNEHGYSQQKDNYAKRLRRIEGQVRGIARMIEEDKYCIDVLTQISAVNSALRSVALNLLDEHLGHCVTRAVAGGGDDAD
EKLAEASAAIARLVRS

Sequences:

>Translated_96_residues
MTNEHGYSQQKDNYAKRLRRIEGQVRGIARMIEEDKYCIDVLTQISAVNSALRSVALNLLDEHLGHCVTRAVAGGGDDAD
EKLAEASAAIARLVRS
>Mature_95_residues
TNEHGYSQQKDNYAKRLRRIEGQVRGIARMIEEDKYCIDVLTQISAVNSALRSVALNLLDEHLGHCVTRAVAGGGDDADE
KLAEASAAIARLVRS

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10525; Mature: 10394

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNEHGYSQQKDNYAKRLRRIEGQVRGIARMIEEDKYCIDVLTQISAVNSALRSVALNLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEHLGHCVTRAVAGGGDDADEKLAEASAAIARLVRS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TNEHGYSQQKDNYAKRLRRIEGQVRGIARMIEEDKYCIDVLTQISAVNSALRSVALNLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEHLGHCVTRAVAGGGDDADEKLAEASAAIARLVRS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]