| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409728
Identifier: 41409728
GI number: 41409728
Start: 4026296
End: 4026730
Strand: Direct
Name: 41409728
Synonym: MAP3630
Alternate gene names: NA
Gene position: 4026296-4026730 (Clockwise)
Preceding gene: 41409725
Following gene: 41409730
Centisome position: 83.36
GC content: 66.9
Gene sequence:
>435_bases ATGAGTACAGTCCATTCATCAATCGATCACCACCCCGATTTGTTGGCTCTGCGGGCCCGCTACGAACGCGTCGCCGAGTC GATGAGTGCGCACTTCACCTTCGGTCTTGCGCTGCTGGCCGGCCTGTACGTGGCGGCCTCACCGTGGATCGTCGGGTTCA GCGCGACGGCATCGCTGGCCACGTCCGACCTGATCGCCGGGATCGCGGCGGCGTTCCTGGCCTACGGGTTCGCGACGACG CTGGACCGTGCGCACGGCATGACCTGGACGCTGCCGGTGCTGGGCGCGTGGGTCATCGTGTCGACCTGGATCCTGCCGGG CGTCGTGCTGACCGCCGGCATGACCTGGTCGAATGTGGTGGCGGGTGCGTTGTTGACGTTCCTGGGTCTCAACGCCACCT ACTTCGGCATGCGCACCCGCGCGTCGGCCGGCTGA
Upstream 100 bases:
>100_bases GTTTTCGTTGCTGGCGGCCGTCGAGCGGGCGTAATCTTGATCACAGATGGATGGGTGCGGTCCGCTCAAAAGGCTTGCCG CATAACAGAAAGGTCACAAA
Downstream 100 bases:
>100_bases TCCACTTTCGGTCGCGAGCGTGCGTGGTCGCCCACGGCACGCTCGCGCCGAAGGCCGAAAGCGCAAGGCGGCCAGGCTAG CCGCAGACGGCGCCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSTVHSSIDHHPDLLALRARYERVAESMSAHFTFGLALLAGLYVAASPWIVGFSATASLATSDLIAGIAAAFLAYGFATT LDRAHGMTWTLPVLGAWVIVSTWILPGVVLTAGMTWSNVVAGALLTFLGLNATYFGMRTRASAG
Sequences:
>Translated_144_residues MSTVHSSIDHHPDLLALRARYERVAESMSAHFTFGLALLAGLYVAASPWIVGFSATASLATSDLIAGIAAAFLAYGFATT LDRAHGMTWTLPVLGAWVIVSTWILPGVVLTAGMTWSNVVAGALLTFLGLNATYFGMRTRASAG >Mature_143_residues STVHSSIDHHPDLLALRARYERVAESMSAHFTFGLALLAGLYVAASPWIVGFSATASLATSDLIAGIAAAFLAYGFATTL DRAHGMTWTLPVLGAWVIVSTWILPGVVLTAGMTWSNVVAGALLTFLGLNATYFGMRTRASAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15145; Mature: 15013
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVHSSIDHHPDLLALRARYERVAESMSAHFTFGLALLAGLYVAASPWIVGFSATASLA CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH TSDLIAGIAAAFLAYGFATTLDRAHGMTWTLPVLGAWVIVSTWILPGVVLTAGMTWSNVV HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AGALLTFLGLNATYFGMRTRASAG HHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure STVHSSIDHHPDLLALRARYERVAESMSAHFTFGLALLAGLYVAASPWIVGFSATASLA CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH TSDLIAGIAAAFLAYGFATTLDRAHGMTWTLPVLGAWVIVSTWILPGVVLTAGMTWSNVV HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AGALLTFLGLNATYFGMRTRASAG HHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA