| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is bglS
Identifier: 41409723
GI number: 41409723
Start: 4022090
End: 4024165
Strand: Direct
Name: bglS
Synonym: MAP3625
Alternate gene names: 41409723
Gene position: 4022090-4024165 (Clockwise)
Preceding gene: 41409722
Following gene: 41409725
Centisome position: 83.28
GC content: 69.85
Gene sequence:
>2076_bases ATGACCGACGACGAGCGGTTCTCGCTGCTGGTCGCGGTGATGGGCGCCGGCGACATGTGGCCGGTGCGCGACGAGCGCAT CCCGGCGGACGTGCCGATGAGCGCGGGTTACGTGCCGGGGGTGCCGCGCCTCGGCGTTCCGCCGCTGCTGATGAGCGACG CCGGACTGGGTGTCACCAACCCCGGCTACCGTCCGGGCGACACCGCCACCGCGCTTCCGGCCGGCATGGCGCTGGCCGCC ACCTTCGATCCGGCGCTGGCCCGCGCCGCGGGCGAACTGATCGGCCGGGAAGCCCGCAGCCGCGGATTCAACGTCCAGCT GGCCGGGGCGATGAACCTGGCCCGCGACCCGCGCAACGGCCGCAACTTCGAATACCTTTCCGAGGACCCGCTTTTGACCG CCGCCATGGTCGCGGAGTCGGTCGCGGGCATCCAGCAACAGGGCGTCATCTCGACCGTCAAGCACTACTCGCTGAACTGC AACGAAACGAATCGCCACTTTCTGGACGCGGTCATCGACCCCGACGCGCACCGCGAATCCGACCTGCTGGCCTTCGAGTT GGCCATCGAACGGGCCCATCCCGGGGCCGTGATGACCGCATACAACAAGGTCAACGGCGTCTACGCCGCGGCGAACAGTG TGTTGCTCAACGACGTCCTCAAGGACGCCTGGGCGTATCGCGGCTGGGTGATGTCGGATTGGGGCGCCACTCCGGGCTGG GAGTGCGCCCTGGGCGGTCTGGATCAGGAATGCGGCGCCCAGATCGACGCGCTGCTGTGGCAGGCCGAATCCTTCGGTGC GCCGCTGCGCGACGCCTACGCCGACGGCCGGTTGCCCAAGGATCGGCTCTCGGACATGGTCCGGCGTATCCTGCGCTCCA TCTTCGCCGTCGGCGTCGACCGGTCGGACCGGGAACCGGCGCCAGATCTCAACGCCCACAACGACATTGCCCTGCGCATC GCGCGGCAGGGCATCGTGCTGCTGACCAACCGCGGGTTGTTGCCGTTGCGCCCCGACTCGCCGGCGCGCATCGCCGTCAT CGGCGGGTACGCGCAACTGGGCGTGCCGGCCGGTTTCGGTTCCAGCACCGTCGTTCCGGCGGGCGGGTATGCCGCCGTGG TGCCGATCGGCGGCACAGGGCTGGAGGCCGGGCTGCGCAACCTGTACCTGCTGCCGTCGAGTCCGCTGCAGGAACTGCGA AGACTTCTGCCCGAGAACACGATTGACTTCGATCCCGGAATCAGCCCGGCCGAGGCGGTGGCGGCGGCACAACGCGCCGA TATCGCGATCGTGTTCGCGGTCCGCGCCGAAGGGGAGGGCTTCGACCTCGCCGATCTGTCGCTGCCGTCGGGCCAGGACG AGCTGATCGGCGCGGTGGCGGCCGCCAACCCCAACACGGTGGTGGTGCTGCAGACCGGCAACCCGGTCACCATGGCGTGG CTGGGAGCGGTGAATGCCGTTGTGCAGGCGTGGTATCCGGGTCAGGCCGGCGCCACGGCCATCGCCGAGGTGCTCACCGG CCGGGTGAATCCCGGCGGTCGGCTGCCGATCACCTTCCCGGTCGACCTGCACCAGACGCCGCGCCCGCAGCTGCCCGGCG CCGGGCTACCGTGGGGAACGCCGAGCACCATCGACTACGTCGAGGGCGCCGACGTCGGCTACCGGTGGTTCGCGGCCAAG GGCCACGTCCCGATGTTCGCCTTCGGACATGGATTGTCCTACACCAGATTTGAACACCGCGACCTGGTCGTGCGGGGCGG CGACACCATCACCGCCGGCTTCACCGTGGTCAACACCGGCGATCGCGCCGGGGCGGATGTACCGCAGCTGTACCTGACGG CGATGCCCGGAAAGCCGTGCCTACGGCTGCTGGGATTCGAGCGGGTCGAGCTGGGCCCGGGCGAGAGCCGGCACGTGACC ATCGACGCCGATCCGCGACTGCTGGCCCACTACGACGGCAGCATCCGAAGCTGGCGGATCGCCGCGGGCAGTCATACGGT GGCGCTGGGGATTTCGGCGACCACCCTGCGCTCGACGGCCACGGTCGAGCTGACCGCTCGTGCGTTCGGGCGATGA
Upstream 100 bases:
>100_bases TGATGGGACCCGAAGTCGGGCATGTGCTGCGCGTCGTCTACGCCAAAGAGGGTGTGCGATGAAAGATCCGGACGAGCGGG CGCGCACAATCGAGGCCCAG
Downstream 100 bases:
>100_bases GGCGCCCGAACGCACGAGCGGGTCAACGGACTACTTGACCGGGGTCAGCGCGTCGCCACAGGTGCAGCGGTACTCCTCAC CGGCACCCGAGCAGTGGCAG
Product: BglS
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MTDDERFSLLVAVMGAGDMWPVRDERIPADVPMSAGYVPGVPRLGVPPLLMSDAGLGVTNPGYRPGDTATALPAGMALAA TFDPALARAAGELIGREARSRGFNVQLAGAMNLARDPRNGRNFEYLSEDPLLTAAMVAESVAGIQQQGVISTVKHYSLNC NETNRHFLDAVIDPDAHRESDLLAFELAIERAHPGAVMTAYNKVNGVYAAANSVLLNDVLKDAWAYRGWVMSDWGATPGW ECALGGLDQECGAQIDALLWQAESFGAPLRDAYADGRLPKDRLSDMVRRILRSIFAVGVDRSDREPAPDLNAHNDIALRI ARQGIVLLTNRGLLPLRPDSPARIAVIGGYAQLGVPAGFGSSTVVPAGGYAAVVPIGGTGLEAGLRNLYLLPSSPLQELR RLLPENTIDFDPGISPAEAVAAAQRADIAIVFAVRAEGEGFDLADLSLPSGQDELIGAVAAANPNTVVVLQTGNPVTMAW LGAVNAVVQAWYPGQAGATAIAEVLTGRVNPGGRLPITFPVDLHQTPRPQLPGAGLPWGTPSTIDYVEGADVGYRWFAAK GHVPMFAFGHGLSYTRFEHRDLVVRGGDTITAGFTVVNTGDRAGADVPQLYLTAMPGKPCLRLLGFERVELGPGESRHVT IDADPRLLAHYDGSIRSWRIAAGSHTVALGISATTLRSTATVELTARAFGR
Sequences:
>Translated_691_residues MTDDERFSLLVAVMGAGDMWPVRDERIPADVPMSAGYVPGVPRLGVPPLLMSDAGLGVTNPGYRPGDTATALPAGMALAA TFDPALARAAGELIGREARSRGFNVQLAGAMNLARDPRNGRNFEYLSEDPLLTAAMVAESVAGIQQQGVISTVKHYSLNC NETNRHFLDAVIDPDAHRESDLLAFELAIERAHPGAVMTAYNKVNGVYAAANSVLLNDVLKDAWAYRGWVMSDWGATPGW ECALGGLDQECGAQIDALLWQAESFGAPLRDAYADGRLPKDRLSDMVRRILRSIFAVGVDRSDREPAPDLNAHNDIALRI ARQGIVLLTNRGLLPLRPDSPARIAVIGGYAQLGVPAGFGSSTVVPAGGYAAVVPIGGTGLEAGLRNLYLLPSSPLQELR RLLPENTIDFDPGISPAEAVAAAQRADIAIVFAVRAEGEGFDLADLSLPSGQDELIGAVAAANPNTVVVLQTGNPVTMAW LGAVNAVVQAWYPGQAGATAIAEVLTGRVNPGGRLPITFPVDLHQTPRPQLPGAGLPWGTPSTIDYVEGADVGYRWFAAK GHVPMFAFGHGLSYTRFEHRDLVVRGGDTITAGFTVVNTGDRAGADVPQLYLTAMPGKPCLRLLGFERVELGPGESRHVT IDADPRLLAHYDGSIRSWRIAAGSHTVALGISATTLRSTATVELTARAFGR >Mature_690_residues TDDERFSLLVAVMGAGDMWPVRDERIPADVPMSAGYVPGVPRLGVPPLLMSDAGLGVTNPGYRPGDTATALPAGMALAAT FDPALARAAGELIGREARSRGFNVQLAGAMNLARDPRNGRNFEYLSEDPLLTAAMVAESVAGIQQQGVISTVKHYSLNCN ETNRHFLDAVIDPDAHRESDLLAFELAIERAHPGAVMTAYNKVNGVYAAANSVLLNDVLKDAWAYRGWVMSDWGATPGWE CALGGLDQECGAQIDALLWQAESFGAPLRDAYADGRLPKDRLSDMVRRILRSIFAVGVDRSDREPAPDLNAHNDIALRIA RQGIVLLTNRGLLPLRPDSPARIAVIGGYAQLGVPAGFGSSTVVPAGGYAAVVPIGGTGLEAGLRNLYLLPSSPLQELRR LLPENTIDFDPGISPAEAVAAAQRADIAIVFAVRAEGEGFDLADLSLPSGQDELIGAVAAANPNTVVVLQTGNPVTMAWL GAVNAVVQAWYPGQAGATAIAEVLTGRVNPGGRLPITFPVDLHQTPRPQLPGAGLPWGTPSTIDYVEGADVGYRWFAAKG HVPMFAFGHGLSYTRFEHRDLVVRGGDTITAGFTVVNTGDRAGADVPQLYLTAMPGKPCLRLLGFERVELGPGESRHVTI DADPRLLAHYDGSIRSWRIAAGSHTVALGISATTLRSTATVELTARAFGR
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=660, Percent_Identity=28.030303030303, Blast_Score=201, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 73164; Mature: 73033
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDERFSLLVAVMGAGDMWPVRDERIPADVPMSAGYVPGVPRLGVPPLLMSDAGLGVTN CCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC PGYRPGDTATALPAGMALAATFDPALARAAGELIGREARSRGFNVQLAGAMNLARDPRNG CCCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCC RNFEYLSEDPLLTAAMVAESVAGIQQQGVISTVKHYSLNCNETNRHFLDAVIDPDAHRES CCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCCHHHEEECCCCCCCC DLLAFELAIERAHPGAVMTAYNKVNGVYAAANSVLLNDVLKDAWAYRGWVMSDWGATPGW CEEEEEEEECCCCCCEEEEEHHHHCCEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC ECALGGLDQECGAQIDALLWQAESFGAPLRDAYADGRLPKDRLSDMVRRILRSIFAVGVD EEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC RSDREPAPDLNAHNDIALRIARQGIVLLTNRGLLPLRPDSPARIAVIGGYAQLGVPAGFG CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCEEEEEECHHHHCCCCCCC SSTVVPAGGYAAVVPIGGTGLEAGLRNLYLLPSSPLQELRRLLPENTIDFDPGISPAEAV CCCEECCCCEEEEEEECCCCHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHH AAAQRADIAIVFAVRAEGEGFDLADLSLPSGQDELIGAVAAANPNTVVVLQTGNPVTMAW HHHHCCCEEEEEEEEECCCCCCEEECCCCCCCHHHEEEEEECCCCEEEEEECCCCEEEHH LGAVNAVVQAWYPGQAGATAIAEVLTGRVNPGGRLPITFPVDLHQTPRPQLPGAGLPWGT HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC PSTIDYVEGADVGYRWFAAKGHVPMFAFGHGLSYTRFEHRDLVVRGGDTITAGFTVVNTG CCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEECCCEEEEECCCEEEECEEEEECC DRAGADVPQLYLTAMPGKPCLRLLGFERVELGPGESRHVTIDADPRLLAHYDGSIRSWRI CCCCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCEEEECCCCCEEEEECCCCEEEEE AAGSHTVALGISATTLRSTATVELTARAFGR ECCCEEEEEEEEHHHCCCEEEEEEEHHHCCC >Mature Secondary Structure TDDERFSLLVAVMGAGDMWPVRDERIPADVPMSAGYVPGVPRLGVPPLLMSDAGLGVTN CCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC PGYRPGDTATALPAGMALAATFDPALARAAGELIGREARSRGFNVQLAGAMNLARDPRNG CCCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCC RNFEYLSEDPLLTAAMVAESVAGIQQQGVISTVKHYSLNCNETNRHFLDAVIDPDAHRES CCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCCHHHEEECCCCCCCC DLLAFELAIERAHPGAVMTAYNKVNGVYAAANSVLLNDVLKDAWAYRGWVMSDWGATPGW CEEEEEEEECCCCCCEEEEEHHHHCCEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC ECALGGLDQECGAQIDALLWQAESFGAPLRDAYADGRLPKDRLSDMVRRILRSIFAVGVD EEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC RSDREPAPDLNAHNDIALRIARQGIVLLTNRGLLPLRPDSPARIAVIGGYAQLGVPAGFG CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCEEEEEECHHHHCCCCCCC SSTVVPAGGYAAVVPIGGTGLEAGLRNLYLLPSSPLQELRRLLPENTIDFDPGISPAEAV CCCEECCCCEEEEEEECCCCHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHH AAAQRADIAIVFAVRAEGEGFDLADLSLPSGQDELIGAVAAANPNTVVVLQTGNPVTMAW HHHHCCCEEEEEEEEECCCCCCEEECCCCCCCHHHEEEEEECCCCEEEEEECCCCEEEHH LGAVNAVVQAWYPGQAGATAIAEVLTGRVNPGGRLPITFPVDLHQTPRPQLPGAGLPWGT HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC PSTIDYVEGADVGYRWFAAKGHVPMFAFGHGLSYTRFEHRDLVVRGGDTITAGFTVVNTG CCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEECCCEEEEECCCEEEECEEEEECC DRAGADVPQLYLTAMPGKPCLRLLGFERVELGPGESRHVTIDADPRLLAHYDGSIRSWRI CCCCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCEEEECCCCCEEEEECCCCEEEEE AAGSHTVALGISATTLRSTATVELTARAFGR ECCCEEEEEEEEHHHCCCEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]