| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409717
Identifier: 41409717
GI number: 41409717
Start: 4016203
End: 4017336
Strand: Direct
Name: 41409717
Synonym: MAP3619
Alternate gene names: NA
Gene position: 4016203-4017336 (Clockwise)
Preceding gene: 41409712
Following gene: 41409720
Centisome position: 83.15
GC content: 70.02
Gene sequence:
>1134_bases GTGTACAAGGTGGGAGTGTGGGGCCCGGGTTCGATGGGCGTGATCGCCCTGCGCGGGGTGATCGACCACCCGCAGCTGGA GCTGGTCGACCTGGTGGTGCACAGCGACGCCAAGGCCGGCCGGGATGCCGGAGAGCTGTGCGGCGTCGCGCCGGTCGGCG TGGTGGCCACCCAGGACCCGGCGGCGATGCTCGCCGGCGACGCCGACGTCGTGGTGTACGCCGCCGGCGCCAACCTGCGG CCGCTGGAGGCCGTCGAGGACATGGTGTCGCTCCTGCGGGCCGGAAAGAACGTGGTGTCGTGCTCGGTGGTGCCGCTGGT CTTTCCCGACGCCGTCGACAGCGCCTTCAGCGAGCCGCTGCGGGCGGCCGCGCTCGAGGGGCAGGTGTCCTTCTTCACCA CCGGCATCGACTCCGGATTCGCCAATGACGTTCTGCCACTGGTACTTACCGGCGTGTCGAGGGTGATCGAATCGGTGCGG GTGACCGAGATGTTCAACTACGCGACCTATCCGGACGCCTCCGCCGTCTATGAGATCCTCGGGTTCGGGCAGCCGCCGGA CTACCCAGCATTCGCGGCCCAGCCGGGCATCTTCACCTTCGGCTGGGGTCCCGTGCTGCACCAGCTGGCCGCCGGACTGG GCGTCGAGATCGACCACATCGAGGAGAGCAACGAGCGCATTCCGGCGCCCGAATCCTTCGACACGCCAACCGGTCACATC GCGGCGGGGACCATCGCCGCGATGCGCTCGACGCTGACCGGCTACGTCGGCGAGAAGCCGACGTTCGTGCTCGACCACGT GACCCGCATGCGTGACGACCTGGCGCCGGATTGGCCCCAGCCGCGGATTGCCATCACGCCCAAGGACTTGGGCTACGGGC TGGCGTCGGGCCGCGGTCTGTACCGGGTGGAGATCGAGGGTTCGCCCAGCATGCGCTGCGAATTCGAGATGGCCGAGGAT CACGACCACGATCTGGGAGCCCGGATTGCCGGGTCGTCGCGGATGGTCAACGCCATCCCGGCGGTGTGCGCGGCGCCGCC CGGCCTGCTGTCGGCGCTGGACCTGCCGCTGATCACCGGGGCCGGGCTGGTGCGCCCGGTGCTGGGGCCACCGCCGGACA GCCGGCTGTTCTAG
Upstream 100 bases:
>100_bases CCCGACCTGCGCGGGGTCTCACCGATTGACTCGGCCACCGTCGCCTTCCTACTATCCGTCCAAAATACCGCAGCAGACGT CCTAATATTAGGAGAAGAGC
Downstream 100 bases:
>100_bases CCCGGAAACGTCGCGGCGGCGAGCCGCAGTATCTCGGCGCGGTCGGCGGGCAGGATGAACCCGGCGCCGATCGCCGCGTC CAGCGCGACGGTGAAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Oxidoreductase; Dihydropicolinate Reductase
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MYKVGVWGPGSMGVIALRGVIDHPQLELVDLVVHSDAKAGRDAGELCGVAPVGVVATQDPAAMLAGDADVVVYAAGANLR PLEAVEDMVSLLRAGKNVVSCSVVPLVFPDAVDSAFSEPLRAAALEGQVSFFTTGIDSGFANDVLPLVLTGVSRVIESVR VTEMFNYATYPDASAVYEILGFGQPPDYPAFAAQPGIFTFGWGPVLHQLAAGLGVEIDHIEESNERIPAPESFDTPTGHI AAGTIAAMRSTLTGYVGEKPTFVLDHVTRMRDDLAPDWPQPRIAITPKDLGYGLASGRGLYRVEIEGSPSMRCEFEMAED HDHDLGARIAGSSRMVNAIPAVCAAPPGLLSALDLPLITGAGLVRPVLGPPPDSRLF
Sequences:
>Translated_377_residues MYKVGVWGPGSMGVIALRGVIDHPQLELVDLVVHSDAKAGRDAGELCGVAPVGVVATQDPAAMLAGDADVVVYAAGANLR PLEAVEDMVSLLRAGKNVVSCSVVPLVFPDAVDSAFSEPLRAAALEGQVSFFTTGIDSGFANDVLPLVLTGVSRVIESVR VTEMFNYATYPDASAVYEILGFGQPPDYPAFAAQPGIFTFGWGPVLHQLAAGLGVEIDHIEESNERIPAPESFDTPTGHI AAGTIAAMRSTLTGYVGEKPTFVLDHVTRMRDDLAPDWPQPRIAITPKDLGYGLASGRGLYRVEIEGSPSMRCEFEMAED HDHDLGARIAGSSRMVNAIPAVCAAPPGLLSALDLPLITGAGLVRPVLGPPPDSRLF >Mature_377_residues MYKVGVWGPGSMGVIALRGVIDHPQLELVDLVVHSDAKAGRDAGELCGVAPVGVVATQDPAAMLAGDADVVVYAAGANLR PLEAVEDMVSLLRAGKNVVSCSVVPLVFPDAVDSAFSEPLRAAALEGQVSFFTTGIDSGFANDVLPLVLTGVSRVIESVR VTEMFNYATYPDASAVYEILGFGQPPDYPAFAAQPGIFTFGWGPVLHQLAAGLGVEIDHIEESNERIPAPESFDTPTGHI AAGTIAAMRSTLTGYVGEKPTFVLDHVTRMRDDLAPDWPQPRIAITPKDLGYGLASGRGLYRVEIEGSPSMRCEFEMAED HDHDLGARIAGSSRMVNAIPAVCAAPPGLLSALDLPLITGAGLVRPVLGPPPDSRLF
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39621; Mature: 39621
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKVGVWGPGSMGVIALRGVIDHPQLELVDLVVHSDAKAGRDAGELCGVAPVGVVATQDP CEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCEEECCCC AAMLAGDADVVVYAAGANLRPLEAVEDMVSLLRAGKNVVSCSVVPLVFPDAVDSAFSEPL HHEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHH RAAALEGQVSFFTTGIDSGFANDVLPLVLTGVSRVIESVRVTEMFNYATYPDASAVYEIL HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GFGQPPDYPAFAAQPGIFTFGWGPVLHQLAAGLGVEIDHIEESNERIPAPESFDTPTGHI CCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCC AAGTIAAMRSTLTGYVGEKPTFVLDHVTRMRDDLAPDWPQPRIAITPKDLGYGLASGRGL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCE YRVEIEGSPSMRCEFEMAEDHDHDLGARIAGSSRMVNAIPAVCAAPPGLLSALDLPLITG EEEEECCCCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHCCHHHCC AGLVRPVLGPPPDSRLF CCHHCCCCCCCCCCCCC >Mature Secondary Structure MYKVGVWGPGSMGVIALRGVIDHPQLELVDLVVHSDAKAGRDAGELCGVAPVGVVATQDP CEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCEEECCCC AAMLAGDADVVVYAAGANLRPLEAVEDMVSLLRAGKNVVSCSVVPLVFPDAVDSAFSEPL HHEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHH RAAALEGQVSFFTTGIDSGFANDVLPLVLTGVSRVIESVRVTEMFNYATYPDASAVYEIL HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GFGQPPDYPAFAAQPGIFTFGWGPVLHQLAAGLGVEIDHIEESNERIPAPESFDTPTGHI CCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCC AAGTIAAMRSTLTGYVGEKPTFVLDHVTRMRDDLAPDWPQPRIAITPKDLGYGLASGRGL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCE YRVEIEGSPSMRCEFEMAEDHDHDLGARIAGSSRMVNAIPAVCAAPPGLLSALDLPLITG EEEEECCCCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHCCHHHCC AGLVRPVLGPPPDSRLF CCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA