| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409716
Identifier: 41409716
GI number: 41409716
Start: 4015250
End: 4016140
Strand: Reverse
Name: 41409716
Synonym: MAP3618c
Alternate gene names: NA
Gene position: 4016140-4015250 (Counterclockwise)
Preceding gene: 41409718
Following gene: 41409715
Centisome position: 83.15
GC content: 70.93
Gene sequence:
>891_bases GTGGCCGAGTCAATCGGTGAGACCCCGCGCAGGTCGGGCGTGAAATCGCCGCCGACCGCGCGGGTAATGGATGTGCTTGC GGCCGTGGCCGATTCACCCGGCGGCCGGACGTCGGCCGAGCTGGCCAAGGGCTGCGCGATCAGCAGTTCGACCTGCGCGC TGGTGCTGGCCGAGCTGGAACGGCGGGCCTGGGTGACGCGGCGCGACGATCGCCGCTACGTGCTGGGCAGCGGCCTGTTC GGGCTGGTGCACGGGCTGCGCGAGCAGTTCCCGCTGCTGGACCGCGGGCGCGACGCGCTGCGCTTGCTGCGCGAGCGGCT CGGCGCGGGCTGCTCCATGTCGAAGATCGGCGCCCGGCACCTGACCACCGTCGACAGCGTCGGCCACGGCACCGACGGCG AACACGCCGTCGGACAGCGCTTCCCCATCGACCCGCCCTTCGGTCTGGTGGCGATGGCCTGGCGCGACGACGATGCCGTC CAGGCCTGGCTGCGTCGCGTGACGCCCCGGCTCACGCGCACCGAGATCGCCCAGCACCAACGGGTGCTCGCCGACATCCG GGCCCGCGGCTACGGCGCGTGGCGGTTCGATGACACGCACCGCTCCCTGCACAATCGGCTGGCCGAGGCGCTGGCATCGC TGGAGCCGACGGCCCAGGTCGCCCGGCGGCTCACCACGCTGATGACCATGGTGACCCTGCGCTCCATCACCGATGTCCTC GAAACAGAGTTGCCCACAACGGAATTCGTGGTGCTTCCGATCTTCGGCCACGACGGCCAGCCGGAATACCAGATCGAGAT ACACCTCGGTCACTCGGCCGGTTTGACTCTGCCCGAACTCGACGACGCGCTGGAACAGGCCCGGCGGCTGCTGACCGCCC CGGTTCGCTGA
Upstream 100 bases:
>100_bases CCCATCGAACCCGGGCCCCACACTCCCACCTTGTACACGCTCTTCTCCTAATATTAGGACGTCTGCTGCGGTATTTTGGA CGGATAGTAGGAAGGCGACG
Downstream 100 bases:
>100_bases GCCGGGCGGCGACTAGTCTGGGGACATGTCAGCCGGCTTCGAGATTCGGCGGGCGGCGACCCGGGCCGTCACCACCACAC CGTGGCTGACATCGCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAESIGETPRRSGVKSPPTARVMDVLAAVADSPGGRTSAELAKGCAISSSTCALVLAELERRAWVTRRDDRRYVLGSGLF GLVHGLREQFPLLDRGRDALRLLRERLGAGCSMSKIGARHLTTVDSVGHGTDGEHAVGQRFPIDPPFGLVAMAWRDDDAV QAWLRRVTPRLTRTEIAQHQRVLADIRARGYGAWRFDDTHRSLHNRLAEALASLEPTAQVARRLTTLMTMVTLRSITDVL ETELPTTEFVVLPIFGHDGQPEYQIEIHLGHSAGLTLPELDDALEQARRLLTAPVR
Sequences:
>Translated_296_residues MAESIGETPRRSGVKSPPTARVMDVLAAVADSPGGRTSAELAKGCAISSSTCALVLAELERRAWVTRRDDRRYVLGSGLF GLVHGLREQFPLLDRGRDALRLLRERLGAGCSMSKIGARHLTTVDSVGHGTDGEHAVGQRFPIDPPFGLVAMAWRDDDAV QAWLRRVTPRLTRTEIAQHQRVLADIRARGYGAWRFDDTHRSLHNRLAEALASLEPTAQVARRLTTLMTMVTLRSITDVL ETELPTTEFVVLPIFGHDGQPEYQIEIHLGHSAGLTLPELDDALEQARRLLTAPVR >Mature_295_residues AESIGETPRRSGVKSPPTARVMDVLAAVADSPGGRTSAELAKGCAISSSTCALVLAELERRAWVTRRDDRRYVLGSGLFG LVHGLREQFPLLDRGRDALRLLRERLGAGCSMSKIGARHLTTVDSVGHGTDGEHAVGQRFPIDPPFGLVAMAWRDDDAVQ AWLRRVTPRLTRTEIAQHQRVLADIRARGYGAWRFDDTHRSLHNRLAEALASLEPTAQVARRLTTLMTMVTLRSITDVLE TELPTTEFVVLPIFGHDGQPEYQIEIHLGHSAGLTLPELDDALEQARRLLTAPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32600; Mature: 32468
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESIGETPRRSGVKSPPTARVMDVLAAVADSPGGRTSAELAKGCAISSSTCALVLAELE CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH RRAWVTRRDDRRYVLGSGLFGLVHGLREQFPLLDRGRDALRLLRERLGAGCSMSKIGARH HHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHCHHH LTTVDSVGHGTDGEHAVGQRFPIDPPFGLVAMAWRDDDAVQAWLRRVTPRLTRTEIAQHQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHH RVLADIRARGYGAWRFDDTHRSLHNRLAEALASLEPTAQVARRLTTLMTMVTLRSITDVL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETELPTTEFVVLPIFGHDGQPEYQIEIHLGHSAGLTLPELDDALEQARRLLTAPVR HHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AESIGETPRRSGVKSPPTARVMDVLAAVADSPGGRTSAELAKGCAISSSTCALVLAELE CCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH RRAWVTRRDDRRYVLGSGLFGLVHGLREQFPLLDRGRDALRLLRERLGAGCSMSKIGARH HHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHCHHH LTTVDSVGHGTDGEHAVGQRFPIDPPFGLVAMAWRDDDAVQAWLRRVTPRLTRTEIAQHQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHH RVLADIRARGYGAWRFDDTHRSLHNRLAEALASLEPTAQVARRLTTLMTMVTLRSITDVL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETELPTTEFVVLPIFGHDGQPEYQIEIHLGHSAGLTLPELDDALEQARRLLTAPVR HHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA