| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409703
Identifier: 41409703
GI number: 41409703
Start: 4001203
End: 4002243
Strand: Direct
Name: 41409703
Synonym: MAP3605
Alternate gene names: NA
Gene position: 4001203-4002243 (Clockwise)
Preceding gene: 41409702
Following gene: 41409704
Centisome position: 82.84
GC content: 65.8
Gene sequence:
>1041_bases ATGAAAATCACCGGAACCCTCGTCAGACTCAGCATCTTCTCGGTGGTGCTGCTGATCTTCACCGTGATGATCATCGTGGT GTTCGGTCAGATGCGCTTCGACCGCACCAACGGGTACTCGGCGGAGTTCAGCAACATCAGCGGGCTGCGCGCCGGCCAGT TCGTCCGCGCCTCGGGGGTCGAGGTCGGCAAGGTCAGTTCGGTGCAGCTGGTCGACGGCGGCAAGCGGGCCCGGGTGGAA TTCAACGTCGACCGCTCGGTGCCGCTGTACCAGTCGACGACGGCGCAGATCCGCTACCTCGACCTGATCGGCAACCGGTA CCTGGAGCTCAAGCGCGGTCAGGGCGAAGGCGCGGACAAGGTGCTGCCGCCCGGCGGGTTCATCCCGCTGTCGCGGACCC AGCCCGCGCTCGACCTCGACGCGCTGATCGGTGGTTTCAAGCCGCTGTTCCGGGCGCTGGACCCGCAGAAGGTCAACACC ATCGCCACCGCGCTGGTCACCGTGTTCCAGGGCCAGGGCGGCACCATCAACGACATCCTCGACCAGACCGCGCAGCTGAC CAGCCAGCTCGGCGAGCGCGACCAGGCGATCGGCGAGGTGATCAAGAACCTGAACACCGTGCTGGACACCACCGTCCGGC ACCGCCAGCAGTTCGACCAGACGATCAACAACCTGGAGGTGTTGATCACCGGGCTCAAGGACCACGGCGACCAGCTGGCC GGCGGGACCGCGCATATCAGCAACGCCGCCGGCACCGTCGCCGACCTGCTCGCCGAGGACCGCTCGCTGCTGCACAAGAC GCTGAACTACCTCGACGCCGTGCAGCAGCCGCTGATCGACCAGCAGGACCAGCTGCAGGACTACCTCAAGAAGGTGCCGA CCGCGTTGAACATGATTGGGCGCGCCATCGGATCCTACGGGGACTTCGTGAACTTCTACGCCTGCGACATCACGCTCAAG ATCAACGGCCTGCAGGCCGGTGGCCCGGTCCGCACGGTCCGGCTGTTCCAGCAGCCGACGGGTAGGTGCACACCGCAATG A
Upstream 100 bases:
>100_bases CCGGCAACAGCCTCGCGCCGTACAACCACCTGGACACCGGATCGCCGTACGCGATCGAGTACGTCTGGGGCCGCCAGGTA GGGGATAACACGATCAACCC
Downstream 100 bases:
>100_bases GAACACTCGAACCCCCCAACCGGGTCCGCATCGGCCTGATGGGCATCGTGGTGACGGTGCTGGTGATCGGCGTCGGCCAG AGTTTCACCAGCGTCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; MCE Family Protein; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mce-Related Protein; MCE-Family C; Mce Family B; Mce Family C; Mce Family D; Mce Family Lipoe; Mce Family Protein Mce5B; MCE-Family; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; ABC-Type Transport System; Virulence Factor MCE-Like Protein; Mce-Family C
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKITGTLVRLSIFSVVLLIFTVMIIVVFGQMRFDRTNGYSAEFSNISGLRAGQFVRASGVEVGKVSSVQLVDGGKRARVE FNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGQGEGADKVLPPGGFIPLSRTQPALDLDALIGGFKPLFRALDPQKVNT IATALVTVFQGQGGTINDILDQTAQLTSQLGERDQAIGEVIKNLNTVLDTTVRHRQQFDQTINNLEVLITGLKDHGDQLA GGTAHISNAAGTVADLLAEDRSLLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLK INGLQAGGPVRTVRLFQQPTGRCTPQ
Sequences:
>Translated_346_residues MKITGTLVRLSIFSVVLLIFTVMIIVVFGQMRFDRTNGYSAEFSNISGLRAGQFVRASGVEVGKVSSVQLVDGGKRARVE FNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGQGEGADKVLPPGGFIPLSRTQPALDLDALIGGFKPLFRALDPQKVNT IATALVTVFQGQGGTINDILDQTAQLTSQLGERDQAIGEVIKNLNTVLDTTVRHRQQFDQTINNLEVLITGLKDHGDQLA GGTAHISNAAGTVADLLAEDRSLLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLK INGLQAGGPVRTVRLFQQPTGRCTPQ >Mature_346_residues MKITGTLVRLSIFSVVLLIFTVMIIVVFGQMRFDRTNGYSAEFSNISGLRAGQFVRASGVEVGKVSSVQLVDGGKRARVE FNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGQGEGADKVLPPGGFIPLSRTQPALDLDALIGGFKPLFRALDPQKVNT IATALVTVFQGQGGTINDILDQTAQLTSQLGERDQAIGEVIKNLNTVLDTTVRHRQQFDQTINNLEVLITGLKDHGDQLA GGTAHISNAAGTVADLLAEDRSLLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIGRAIGSYGDFVNFYACDITLK INGLQAGGPVRTVRLFQQPTGRCTPQ
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37729; Mature: 37729
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITGTLVRLSIFSVVLLIFTVMIIVVFGQMRFDRTNGYSAEFSNISGLRAGQFVRASGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EVGKVSSVQLVDGGKRARVEFNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGQGEGADK CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHEEHHHHHCCCCEEEECCCCCCCCC VLPPGGFIPLSRTQPALDLDALIGGFKPLFRALDPQKVNTIATALVTVFQGQGGTINDIL CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHH DQTAQLTSQLGERDQAIGEVIKNLNTVLDTTVRHRQQFDQTINNLEVLITGLKDHGDQLA HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCHHC GGTAHISNAAGTVADLLAEDRSLLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIG CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RAIGSYGDFVNFYACDITLKINGLQAGGPVRTVRLFQQPTGRCTPQ HHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKITGTLVRLSIFSVVLLIFTVMIIVVFGQMRFDRTNGYSAEFSNISGLRAGQFVRASGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EVGKVSSVQLVDGGKRARVEFNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGQGEGADK CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHEEHHHHHCCCCEEEECCCCCCCCC VLPPGGFIPLSRTQPALDLDALIGGFKPLFRALDPQKVNTIATALVTVFQGQGGTINDIL CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHH DQTAQLTSQLGERDQAIGEVIKNLNTVLDTTVRHRQQFDQTINNLEVLITGLKDHGDQLA HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCHHC GGTAHISNAAGTVADLLAEDRSLLHKTLNYLDAVQQPLIDQQDQLQDYLKKVPTALNMIG CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RAIGSYGDFVNFYACDITLKINGLQAGGPVRTVRLFQQPTGRCTPQ HHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA