Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409678

Identifier: 41409678

GI number: 41409678

Start: 3978510

End: 3979334

Strand: Reverse

Name: 41409678

Synonym: MAP3580c

Alternate gene names: NA

Gene position: 3979334-3978510 (Counterclockwise)

Preceding gene: 41409679

Following gene: 41409677

Centisome position: 82.39

GC content: 71.64

Gene sequence:

>825_bases
TTGACGATGACCGACGCCTACTACGAGCTGATCGACTCCAACGCGTCGGGCGAGAGGTTCCGGGCCACCGATCTGGCGCG
CGGCACCTGGTCGGCGACGATCCAGCACGGCGGTCCGGTATCGGCGCTGCTGACGCGGGCCCTGGAGCGCTGCGAGCAGC
GCGACGACACCCGGCTGTCCCGGGTGGTGATCGACCTGCTGGGTGGGGTGCCGGTCGAGGGCGACCTGTGGGTGCGCGCG
GAGGTGCAGCGCCCCGGCAAGCAGATCGAACTGCTCGGCGCCCAGATGCTGGCGCCGGGGCCCGACGGCGCCCCGCGGCC
GGTGGCGCGCGCCAGCGGCTGGCGGTTGCAGCACCAGGACACCGGATCCCTGGCGCACGCGGCGGCGCCGCTGCCGCGTC
CGCGGGCCGAGGCCTACGACCGCAACCTCAAGGCGCGCGACTGGGACCGCAACTACGTGCACAGCCTGCAGTGGCTGTGG
TTGACCGAGCCGCTGAGCGAGGGCCCCGGGGAATCCTGGATCAGCCCGACCGTCGACCTGGTGAAGGGCGAATCGATGAC
CCGGCTACAGCGGCTGTTCGCGGTGGCCGACTGCGCCAACGGCATCGGCAGCAAGCTGGACATCACCAAGTGGACGTTCC
TCAACACCGATCTGGCCGTGCACGTGTTCCGGGTCCCCGACGGCGACTGGATCGGCATCCGGGCCGAGACCAGCTACGGG
CCGGACGGGATCGGCACGACGATCGGCACGTTGTTCGACGAGCAGGGCGCCGTGGGCGCCATCCAGCAGTCGGTTCTGGT
GCGCCGGCGTCCCGGTCGGGCCTAA

Upstream 100 bases:

>100_bases
GACGCCTATCCTCAGCGTCTGGTCGGCACCCGCCTGTCCCGGTTGGATGCCGTCACGGTGACCACGCCCGGCGCCGGCCT
GCCCTGACTTTCCGGAGAGG

Downstream 100 bases:

>100_bases
CGTGGGAGCGAATGACCATGACACCGCGGCGACACTTCGTAAAGTTTGAATCATGAGCCACCCGGTCCGGGCGACGGCGA
TCGCCGACACCGACACCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTMTDAYYELIDSNASGERFRATDLARGTWSATIQHGGPVSALLTRALERCEQRDDTRLSRVVIDLLGGVPVEGDLWVRA
EVQRPGKQIELLGAQMLAPGPDGAPRPVARASGWRLQHQDTGSLAHAAAPLPRPRAEAYDRNLKARDWDRNYVHSLQWLW
LTEPLSEGPGESWISPTVDLVKGESMTRLQRLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRVPDGDWIGIRAETSYG
PDGIGTTIGTLFDEQGAVGAIQQSVLVRRRPGRA

Sequences:

>Translated_274_residues
MTMTDAYYELIDSNASGERFRATDLARGTWSATIQHGGPVSALLTRALERCEQRDDTRLSRVVIDLLGGVPVEGDLWVRA
EVQRPGKQIELLGAQMLAPGPDGAPRPVARASGWRLQHQDTGSLAHAAAPLPRPRAEAYDRNLKARDWDRNYVHSLQWLW
LTEPLSEGPGESWISPTVDLVKGESMTRLQRLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRVPDGDWIGIRAETSYG
PDGIGTTIGTLFDEQGAVGAIQQSVLVRRRPGRA
>Mature_273_residues
TMTDAYYELIDSNASGERFRATDLARGTWSATIQHGGPVSALLTRALERCEQRDDTRLSRVVIDLLGGVPVEGDLWVRAE
VQRPGKQIELLGAQMLAPGPDGAPRPVARASGWRLQHQDTGSLAHAAAPLPRPRAEAYDRNLKARDWDRNYVHSLQWLWL
TEPLSEGPGESWISPTVDLVKGESMTRLQRLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRVPDGDWIGIRAETSYGP
DGIGTTIGTLFDEQGAVGAIQQSVLVRRRPGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30103; Mature: 29972

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTDAYYELIDSNASGERFRATDLARGTWSATIQHGGPVSALLTRALERCEQRDDTRLS
CCCCHHHHHHHCCCCCCCEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
RVVIDLLGGVPVEGDLWVRAEVQRPGKQIELLGAQMLAPGPDGAPRPVARASGWRLQHQD
HHHHHHHCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
TGSLAHAAAPLPRPRAEAYDRNLKARDWDRNYVHSLQWLWLTEPLSEGPGESWISPTVDL
CCCHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHEEEEEEECCHHCCCCCCCCCCCHHH
VKGESMTRLQRLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRVPDGDWIGIRAETSYG
HCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCC
PDGIGTTIGTLFDEQGAVGAIQQSVLVRRRPGRA
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TMTDAYYELIDSNASGERFRATDLARGTWSATIQHGGPVSALLTRALERCEQRDDTRLS
CCCHHHHHHHCCCCCCCEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
RVVIDLLGGVPVEGDLWVRAEVQRPGKQIELLGAQMLAPGPDGAPRPVARASGWRLQHQD
HHHHHHHCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
TGSLAHAAAPLPRPRAEAYDRNLKARDWDRNYVHSLQWLWLTEPLSEGPGESWISPTVDL
CCCHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHEEEEEEECCHHCCCCCCCCCCCHHH
VKGESMTRLQRLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRVPDGDWIGIRAETSYG
HCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCC
PDGIGTTIGTLFDEQGAVGAIQQSVLVRRRPGRA
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA