| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409674
Identifier: 41409674
GI number: 41409674
Start: 3974672
End: 3975772
Strand: Direct
Name: 41409674
Synonym: MAP3576
Alternate gene names: NA
Gene position: 3974672-3975772 (Clockwise)
Preceding gene: 41409673
Following gene: 41409675
Centisome position: 82.3
GC content: 68.85
Gene sequence:
>1101_bases ATGGCGATCCGCGTCGCGCACGTCGGCACCGGAAACGTCGGCGGACTGGCCCTCGCCGAACTGATCACCAACCCGCGCTA CGAGCTGACCGGGGTGTGCGTGTCCACCCCGGAGAAGGTCGGCAAGGACGCCGGCGAGCTGTGCGGCGTCGGACTCGATA CCGGGGTGGTCACCGGCGTCGCCGCCGTCGGCGACCTGGACGCCGTCATCGCCGCCAAGCCCGAATGCGTGGTGTACTGC GCGATGGGCGACACCCGGCTGCCCGAGGCGATGGCCGACGTCATGCGCATCCTGGCCGCCGGCATCAACGTCGTCGGATC GTCGCCCGGGCTGCTGCAATACCCCTGGGGTGTGATGCCCGAGAAGTACATCGCCCGCGTGGAAGACGCTGCCAGGCAAG GCAATTCGAGCATCTTCATCAGCGGTGTCGACCCGGGCTTCGCCAATGACCTGATCCCGCTGGCACTGGCGGGAACCTGT CAGCGGGTGGAGCAGGTGCGCTGCATGGAGATTCACGACTACGCCAGCTACAACGGCGCGGAAGTCATGGGCTACATGGG ATTCGGCCGTCCGCTCGACGAGATCCCGATGCTGCTGCAGCCGGGAGTCCTCAGCATCGCCTGGGGAACCGCGATCCGTC AGCTGGCCGCCGGGCTGGGCATCGAGGTCGACGAGATCACCGAGTCCTACCAGCGCGAGCCGGCGCCGGAGGACTTCGAC ATCGCGGTGGGCCGAGTGGCCAAGGGCACGCTGGCGGTGCTGCAGTTCGAGATTCGCGGCATGGTCAACGGCCACCCCGC CATCGTCATCGAGCACGTCACCCGGCTGCGGCCGGATCTGCGCCCCGACCTGCCGCAGCCAGCCGCGGGCGACGGGTCCT ACCGGGTCGAGATCACCGGGGAGCCGTCGTACGCCGTCGACATCGTCCCGAGCAGCCGCAAGGGCGACCACAACCACGCC GCGATCGCGGGAGCCGCGGGCCGTATCGTCAACGCCATCCCGGCGGTGATCGCGGCGCCACCCGGCATCCGCACCACCCT CGATCTGCCGCTGGTGACCGGCAAAGGCCTTTACGCACCAAGCACTTTGGTGACCACCTGA
Upstream 100 bases:
>100_bases ACGGACGCGGAACCGCCGGCGGCTCCGGGCCGGTAGGCGCCGCCCATTTAATGGACTAGTGTCTAGAAAAGTTTTGGGCG CTCAACGGACGGAGACTGTC
Downstream 100 bases:
>100_bases ATCGAAAGGAGACCCGCGTGGGACGGGTAGACGGCAAGGTTGCGCTGATCAGCGGGGGCGCCCGCGGCATGGGCGCCGAG CACGCGCGGCTGCTGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Dihydropicolinate Reductase
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MAIRVAHVGTGNVGGLALAELITNPRYELTGVCVSTPEKVGKDAGELCGVGLDTGVVTGVAAVGDLDAVIAAKPECVVYC AMGDTRLPEAMADVMRILAAGINVVGSSPGLLQYPWGVMPEKYIARVEDAARQGNSSIFISGVDPGFANDLIPLALAGTC QRVEQVRCMEIHDYASYNGAEVMGYMGFGRPLDEIPMLLQPGVLSIAWGTAIRQLAAGLGIEVDEITESYQREPAPEDFD IAVGRVAKGTLAVLQFEIRGMVNGHPAIVIEHVTRLRPDLRPDLPQPAAGDGSYRVEITGEPSYAVDIVPSSRKGDHNHA AIAGAAGRIVNAIPAVIAAPPGIRTTLDLPLVTGKGLYAPSTLVTT
Sequences:
>Translated_366_residues MAIRVAHVGTGNVGGLALAELITNPRYELTGVCVSTPEKVGKDAGELCGVGLDTGVVTGVAAVGDLDAVIAAKPECVVYC AMGDTRLPEAMADVMRILAAGINVVGSSPGLLQYPWGVMPEKYIARVEDAARQGNSSIFISGVDPGFANDLIPLALAGTC QRVEQVRCMEIHDYASYNGAEVMGYMGFGRPLDEIPMLLQPGVLSIAWGTAIRQLAAGLGIEVDEITESYQREPAPEDFD IAVGRVAKGTLAVLQFEIRGMVNGHPAIVIEHVTRLRPDLRPDLPQPAAGDGSYRVEITGEPSYAVDIVPSSRKGDHNHA AIAGAAGRIVNAIPAVIAAPPGIRTTLDLPLVTGKGLYAPSTLVTT >Mature_365_residues AIRVAHVGTGNVGGLALAELITNPRYELTGVCVSTPEKVGKDAGELCGVGLDTGVVTGVAAVGDLDAVIAAKPECVVYCA MGDTRLPEAMADVMRILAAGINVVGSSPGLLQYPWGVMPEKYIARVEDAARQGNSSIFISGVDPGFANDLIPLALAGTCQ RVEQVRCMEIHDYASYNGAEVMGYMGFGRPLDEIPMLLQPGVLSIAWGTAIRQLAAGLGIEVDEITESYQREPAPEDFDI AVGRVAKGTLAVLQFEIRGMVNGHPAIVIEHVTRLRPDLRPDLPQPAAGDGSYRVEITGEPSYAVDIVPSSRKGDHNHAA IAGAAGRIVNAIPAVIAAPPGIRTTLDLPLVTGKGLYAPSTLVTT
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38253; Mature: 38122
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRVAHVGTGNVGGLALAELITNPRYELTGVCVSTPEKVGKDAGELCGVGLDTGVVTGV CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHCCCHHHHHCCCCCHHHHHHH AAVGDLDAVIAAKPECVVYCAMGDTRLPEAMADVMRILAAGINVVGSSPGLLQYPWGVMP HHHCCCHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEECCCCCCC EKYIARVEDAARQGNSSIFISGVDPGFANDLIPLALAGTCQRVEQVRCMEIHDYASYNGA HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCCCC EVMGYMGFGRPLDEIPMLLQPGVLSIAWGTAIRQLAAGLGIEVDEITESYQREPAPEDFD EEEEECCCCCCHHHCCHHHCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC IAVGRVAKGTLAVLQFEIRGMVNGHPAIVIEHVTRLRPDLRPDLPQPAAGDGSYRVEITG EEHHHHCCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC EPSYAVDIVPSSRKGDHNHAAIAGAAGRIVNAIPAVIAAPPGIRTTLDLPLVTGKGLYAP CCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEECEEEECCCCCCC STLVTT CCEECC >Mature Secondary Structure AIRVAHVGTGNVGGLALAELITNPRYELTGVCVSTPEKVGKDAGELCGVGLDTGVVTGV EEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHCCCHHHHHCCCCCHHHHHHH AAVGDLDAVIAAKPECVVYCAMGDTRLPEAMADVMRILAAGINVVGSSPGLLQYPWGVMP HHHCCCHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEECCCCCCC EKYIARVEDAARQGNSSIFISGVDPGFANDLIPLALAGTCQRVEQVRCMEIHDYASYNGA HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCCCC EVMGYMGFGRPLDEIPMLLQPGVLSIAWGTAIRQLAAGLGIEVDEITESYQREPAPEDFD EEEEECCCCCCHHHCCHHHCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC IAVGRVAKGTLAVLQFEIRGMVNGHPAIVIEHVTRLRPDLRPDLPQPAAGDGSYRVEITG EEHHHHCCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC EPSYAVDIVPSSRKGDHNHAAIAGAAGRIVNAIPAVIAAPPGIRTTLDLPLVTGKGLYAP CCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEECEEEECCCCCCC STLVTT CCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA