| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409617
Identifier: 41409617
GI number: 41409617
Start: 3920117
End: 3920734
Strand: Direct
Name: 41409617
Synonym: MAP3519
Alternate gene names: NA
Gene position: 3920117-3920734 (Clockwise)
Preceding gene: 41409615
Following gene: 41409619
Centisome position: 81.17
GC content: 71.52
Gene sequence:
>618_bases TTGGGGGAAGGAAGCTGCGTGCAGGCCGCTCGGATCGGCATCGCCGGCTGCGCTGCCGTCGTCATCGCGGCCGCCGGTTG CGGAGGCGGCGGCAAGGGCTCGTCGCCGGGCTCCGGTTCGCCCACGCCGCCGAGCAGTTCGGGCGCCGTCACCGGCCCGC CGCCGGGACAACCCAGCGACTACGGCTACCTGCTGATCAAGCCGAGCGACGTCGGCGGAGGTCTGAGCGCTCCCCAGTCA CCGATGCTCAACCCCAACAATGCCCCAGGGGCCGCGCAGCTTTTCGCCAACGCCGACAGCAGCCGGCGGCTGTGGGACAC CATCGTGATCGCCGCCGACGCCCCGGCCGCCACCGCCGAACTGGCCGCCACCAAGAGCAGCTACGCCGGCAAGGTGAACG GCGACTGGCGCCCGGTTGCCGTCGGCGCCAACGGGACAACGATTTCGGGCGGCTCCTCGGACAACACCCAGGCGATGACG GTGCTGTTGTTCACCGAGGGCAGGGCCCTGGTCACCCTGGAATTCGACAGCGCGCCCAACGACCCGATCGACCCGGCCGT CGCGGTCGACATCGCACGCAAGCAGGACGCCGCGATCAGGACCGGGCTGCCCGGCTAG
Upstream 100 bases:
>100_bases GCGGCACTACCCACCGGCCGAGAATTGGGCATATGTTCATAACAGCTGCCCGATGCCCACCGGCGTTTCGCCGGCGGCGT TGGGGCGGTGGTGAACCTCG
Downstream 100 bases:
>100_bases CCGCGAAAGACCGCCGGGGTCAATGTGTTTCGGTGACGGCAACGGATGCTGCGAGCCGGCGGAGCCGAAACCGGCTGCGG CCGTGGCTATCTGACGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MGEGSCVQAARIGIAGCAAVVIAAAGCGGGGKGSSPGSGSPTPPSSSGAVTGPPPGQPSDYGYLLIKPSDVGGGLSAPQS PMLNPNNAPGAAQLFANADSSRRLWDTIVIAADAPAATAELAATKSSYAGKVNGDWRPVAVGANGTTISGGSSDNTQAMT VLLFTEGRALVTLEFDSAPNDPIDPAVAVDIARKQDAAIRTGLPG
Sequences:
>Translated_205_residues MGEGSCVQAARIGIAGCAAVVIAAAGCGGGGKGSSPGSGSPTPPSSSGAVTGPPPGQPSDYGYLLIKPSDVGGGLSAPQS PMLNPNNAPGAAQLFANADSSRRLWDTIVIAADAPAATAELAATKSSYAGKVNGDWRPVAVGANGTTISGGSSDNTQAMT VLLFTEGRALVTLEFDSAPNDPIDPAVAVDIARKQDAAIRTGLPG >Mature_204_residues GEGSCVQAARIGIAGCAAVVIAAAGCGGGGKGSSPGSGSPTPPSSSGAVTGPPPGQPSDYGYLLIKPSDVGGGLSAPQSP MLNPNNAPGAAQLFANADSSRRLWDTIVIAADAPAATAELAATKSSYAGKVNGDWRPVAVGANGTTISGGSSDNTQAMTV LLFTEGRALVTLEFDSAPNDPIDPAVAVDIARKQDAAIRTGLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19987; Mature: 19856
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGSCVQAARIGIAGCAAVVIAAAGCGGGGKGSSPGSGSPTPPSSSGAVTGPPPGQPSD CCCCCEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGYLLIKPSDVGGGLSAPQSPMLNPNNAPGAAQLFANADSSRRLWDTIVIAADAPAATAE CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHH LAATKSSYAGKVNGDWRPVAVGANGTTISGGSSDNTQAMTVLLFTEGRALVTLEFDSAPN HHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCC DPIDPAVAVDIARKQDAAIRTGLPG CCCCCEEEEEECCCCCCEECCCCCC >Mature Secondary Structure GEGSCVQAARIGIAGCAAVVIAAAGCGGGGKGSSPGSGSPTPPSSSGAVTGPPPGQPSD CCCCEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGYLLIKPSDVGGGLSAPQSPMLNPNNAPGAAQLFANADSSRRLWDTIVIAADAPAATAE CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHH LAATKSSYAGKVNGDWRPVAVGANGTTISGGSSDNTQAMTVLLFTEGRALVTLEFDSAPN HHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCC DPIDPAVAVDIARKQDAAIRTGLPG CCCCCEEEEEECCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA