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The map label for this gene is yafE [C]

Identifier: 41409557

GI number: 41409557

Start: 3841417

End: 3842148

Strand: Direct

Name: yafE [C]

Synonym: MAP3459

Alternate gene names: 41409557

Gene position: 3841417-3842148 (Clockwise)

Preceding gene: 41409556

Following gene: 41409559

Centisome position: 79.54

GC content: 71.17

Gene sequence:

>732_bases
GTGACCCGCTCGCGCCACGACCGCTCCCTCTCGTTCGGCTCGGCGGCCGCAGCCTACGAGCGTGGGCGGCCCTCCTATCC
GCCGGAGGCGATCGACTGGCTGCTGCCGGTCGGCGCGCGTCAGGTGCTCGACCTCGGCGCGGGCACCGGCAAGCTGACCA
CCCGGCTGGTGGAACGCGGCCTGGACGTGGTGGCCGTCGACCCGATTCCGGACATGTTGGAGGTGTTGCGGAGCTCGCTG
CCGGAGACCCGGGCGCTGCTGGGCACCGCCGAAGAAATCCCGTTGGAAGACAACAGCGTTGACGTGGTGTTGGTGGCGCA
GGCCTGGCATTGGGTGGATCCGGAGCGGGCGATTCCGGAGGTGGCCCGGGTGCTGCGGCCCGGCGGGCGGCTCGGCCTGG
TGTGGAACACCCGCGACGAGCGGCTGGGCTGGGTGCGCGAACTGGGCCGCATCATCGGAAGCGACGGCGACGGCCGCACC
CACGTGACGCTGCCCGAGCCGTTCACCGACCTGGCGCACCATGAGGTCGAGTGGACGAATTACCTTACGCCGCAAGCATT
GATCGACCTGGTGGCGTCGCGCAGCTACTGCATCACCTCGCCGACCGAGGTGCGCACCCGAACCCTGGACCAGGTCCGCC
ACCTGCTGGCCACGCATCCGGCGCTGGCGAATTCGACCGGCCTGGCGCTGCCCTACGTCACCCGGTGCACCCGGGCGACG
CTGGCCGGCTGA

Upstream 100 bases:

>100_bases
CGGTCGGCGAAATGATCCGCAAGACACTGCTGTTGGCCGGTTCGCAGAGCGCCGGCCCGGGCGGCGCCGGCCCGGGGAGC
AGGAAAGGCACGACCCGCCG

Downstream 100 bases:

>100_bases
GCGCCGGGTCAATCGGGTTCGTCCCCGTCAACTTCGCCGTCGTCGTCCTCACCCTGTAGGAGTTTTTCGGGGTGGTGGAA
GGTGTTGGTGCGGGGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTRSRHDRSLSFGSAAAAYERGRPSYPPEAIDWLLPVGARQVLDLGAGTGKLTTRLVERGLDVVAVDPIPDMLEVLRSSL
PETRALLGTAEEIPLEDNSVDVVLVAQAWHWVDPERAIPEVARVLRPGGRLGLVWNTRDERLGWVRELGRIIGSDGDGRT
HVTLPEPFTDLAHHEVEWTNYLTPQALIDLVASRSYCITSPTEVRTRTLDQVRHLLATHPALANSTGLALPYVTRCTRAT
LAG

Sequences:

>Translated_243_residues
MTRSRHDRSLSFGSAAAAYERGRPSYPPEAIDWLLPVGARQVLDLGAGTGKLTTRLVERGLDVVAVDPIPDMLEVLRSSL
PETRALLGTAEEIPLEDNSVDVVLVAQAWHWVDPERAIPEVARVLRPGGRLGLVWNTRDERLGWVRELGRIIGSDGDGRT
HVTLPEPFTDLAHHEVEWTNYLTPQALIDLVASRSYCITSPTEVRTRTLDQVRHLLATHPALANSTGLALPYVTRCTRAT
LAG
>Mature_242_residues
TRSRHDRSLSFGSAAAAYERGRPSYPPEAIDWLLPVGARQVLDLGAGTGKLTTRLVERGLDVVAVDPIPDMLEVLRSSLP
ETRALLGTAEEIPLEDNSVDVVLVAQAWHWVDPERAIPEVARVLRPGGRLGLVWNTRDERLGWVRELGRIIGSDGDGRTH
VTLPEPFTDLAHHEVEWTNYLTPQALIDLVASRSYCITSPTEVRTRTLDQVRHLLATHPALANSTGLALPYVTRCTRATL
AG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26744; Mature: 26613

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRHDRSLSFGSAAAAYERGRPSYPPEAIDWLLPVGARQVLDLGAGTGKLTTRLVERG
CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCC
LDVVAVDPIPDMLEVLRSSLPETRALLGTAEEIPLEDNSVDVVLVAQAWHWVDPERAIPE
CCEEEECCCHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCCHHHHHHH
VARVLRPGGRLGLVWNTRDERLGWVRELGRIIGSDGDGRTHVTLPEPFTDLAHHEVEWTN
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCHHHH
YLTPQALIDLVASRSYCITSPTEVRTRTLDQVRHLLATHPALANSTGLALPYVTRCTRAT
CCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LAG
CCC
>Mature Secondary Structure 
TRSRHDRSLSFGSAAAAYERGRPSYPPEAIDWLLPVGARQVLDLGAGTGKLTTRLVERG
CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCC
LDVVAVDPIPDMLEVLRSSLPETRALLGTAEEIPLEDNSVDVVLVAQAWHWVDPERAIPE
CCEEEECCCHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCCHHHHHHH
VARVLRPGGRLGLVWNTRDERLGWVRELGRIIGSDGDGRTHVTLPEPFTDLAHHEVEWTN
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCHHHH
YLTPQALIDLVASRSYCITSPTEVRTRTLDQVRHLLATHPALANSTGLALPYVTRCTRAT
CCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]