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The map label for this gene is yhjD [H]

Identifier: 41409550

GI number: 41409550

Start: 3831879

End: 3832907

Strand: Reverse

Name: yhjD [H]

Synonym: MAP3452c

Alternate gene names: 41409550

Gene position: 3832907-3831879 (Counterclockwise)

Preceding gene: 41409551

Following gene: 41409544

Centisome position: 79.36

GC content: 66.96

Gene sequence:

>1029_bases
ATGAGCGAGCCGGCCGAGGCGGGGTTTCTTGATCGGCTGCGGGCCCGGCACGGCTGGCTGGATCACCTCATCCGCGCCTA
CCAGCGATTCGACGACCGCAACGGCGGCTTCTTCGCGGCGGGCCTGACGTATTACACGATCTTCGCGTTGTTTCCGTTGC
TGATGGTCGGTTTCGCGGTGTTCGGTTTCGTGCTGGCGCGGCGGCCGCAACTGCTCAGCAGCATCGACGACCACATCCGC
TCGCAAGTGAACGGGGCGCTGGGAAATCAGCTGCAGGAGTTGATGAACTCGGCGATCGATGCCCGGACGTCGGTCGGGGT
GATCGGCCTGGCCACCGCGGTGTGGGCGGGGCTGGGCTGGATATCGCATCTGCGCCAGGCGTTGACCGAGATGTGGTGGG
ACACCCAGATCGAGTCGCCGGGCTTCGTGCGCAACAAGCTCTCCGACCTGCTGGCCATGGTGGGGACGTTCGCGGTCATC
GTGGCCACCGTCGGGCTGACCACCGTCGGCCACGCCGCACCCATGGCCGCGCTGCTGAAATGGCTTGGCATACCGCAGTT
CGTGGTCTTCGACTGGCTGTTCTGGATTTTCTCCATACTGATCGCGACGCTGGTGTCGTGGCTGCTGTTCACCTGGATGA
TCGCCCGGCTGCCGCGGGAGAAGGTCAGTTTCGTGGATTCGATGCGGGCCGGGCTGATCGCCGCGATCGGCTTCGAGGTG
TTCAAACAGGTCGCGTCGATCTATCTGCGGACGGTGCTGCGCAGCCCGGCCGGCGCCGCCTTCGGCCCGGTGCTCGGGTT
GATGGTATTCGCTTACATCACAGCCTATCTCGTGCTGTTCTGCACGGCGTGGGCGGCGACCGCGTCCACCGATCCGCGTG
ATCGGCCCGTCGCCCCTCCGGCGCCGGCGATCATCGCGCCGCGGGTGCACCTGGACGAGGGGCTGAACACCCGCCAGACG
CTGACCGCGATGGGCCTGGGAGCCGTTGCGGCGCTGGCGTTCGACCGGCTCACCCGCCGGCGCCGCTAG

Upstream 100 bases:

>100_bases
CGGCCGGGGCGCAACGGGCCCAGGATGTCGCCGGGAAAACCGTCGAACGGGTTTACGATCGGCTTGGGTTCCTTCCGCGA
CGGGGGTAAGAAGTTCCACG

Downstream 100 bases:

>100_bases
CCGAGCAGCTTCAGTCCCGCGACGCAGGCCACGATCCCGGCGATCAGCACCAGCTTGACCGGCGACGCCGGTTCGTCGCC
GACCAGCGCCGCATAGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARRPQLLSSIDDHIR
SQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQIESPGFVRNKLSDLLAMVGTFAVI
VATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEV
FKQVASIYLRTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATASTDPRDRPVAPPAPAIIAPRVHLDEGLNTRQT
LTAMGLGAVAALAFDRLTRRRR

Sequences:

>Translated_342_residues
MSEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARRPQLLSSIDDHIR
SQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQIESPGFVRNKLSDLLAMVGTFAVI
VATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEV
FKQVASIYLRTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATASTDPRDRPVAPPAPAIIAPRVHLDEGLNTRQT
LTAMGLGAVAALAFDRLTRRRR
>Mature_341_residues
SEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARRPQLLSSIDDHIRS
QVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQIESPGFVRNKLSDLLAMVGTFAVIV
ATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEVF
KQVASIYLRTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATASTDPRDRPVAPPAPAIIAPRVHLDEGLNTRQTL
TAMGLGAVAALAFDRLTRRRR

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=286, Percent_Identity=38.1118881118881, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 37684; Mature: 37552

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
FGFVLARRPQLLSSIDDHIRSQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISHLRQALTEMWWDTQIESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGIPQFVVFDWLFWIFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FKQVASIYLRTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATASTDPRDRPVAPP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
APAIIAPRVHLDEGLNTRQTLTAMGLGAVAALAFDRLTRRRR
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH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CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]