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The map label for this gene is sigJ

Identifier: 41409544

GI number: 41409544

Start: 3825108

End: 3825995

Strand: Reverse

Name: sigJ

Synonym: MAP3446c

Alternate gene names: NA

Gene position: 3825995-3825108 (Counterclockwise)

Preceding gene: 41409550

Following gene: 41409538

Centisome position: 79.22

GC content: 71.4

Gene sequence:

>888_bases
GTGCCGGGCGAAGTGCAGCCAGAGGTGCTCATGTCGGTCGCCTACCGGCTGACCGGTACGGTCGCCGACGCCGAGGACAT
CGTCCAGGACGCGTGGCTGCGCCGGCACGGGCAGGACGGCGCCATCACCGATCTACGAGCGTGGCTGACCACGGTGGTCA
GCAGGCTGGGCCTGGACAGGTTGCGCTCGGCCACGCACCGCCGCGAGACCTACACCGGCAACTGGCTGCCCGAGCCGGTG
GTCACCGGGTTGGGCCCGCATTCCGGCGCCGATCCGCTGGCCGCCGTGGTGGCCGGCGAGGACGCCCGGTTCGCGGCGAT
GGTGGTGCTGGAGCGGTTGTCGCCCGATCAGCGGGTGGCGTTCGTGCTGCACGACGGGTTCGCCGTGCCGTTCTCGGAGG
TGGCCGAGGTGCTGGGCACCAGCGAGGCCGCCGCCCGGCAGCTGGCGTCGCGGGCGCGCAAGGTCGTCAGCGCGCAGCCG
CCACCCGAGCCCGACCCGTCGCACGACGAGGTGGTGGGACAGCTGATGGCCGCCATGGCCGCCGGCAACCTGGAGGCCGT
GGTGGCGCTGCTGCACCCCGACGTGATGTTCACCGGCGACTCGAATGGCAAGGCGCCCACCGCCGTTCAGGTCATCCACG
GCGCGGACAAGGTGGTGCGGTTCATGCTCGGCCTGGCCCGCCGCTACGGCCCCGGCTTCTATTCCGCCTACCAGCTGGGG
CTGGTCAACGGCGAGCTGGGCATCTACACGGCGGGCCTGCCGGGCGGTGACGGCTATCGGGAGATGTGCCCGCGGATCAT
GGCGATGACGGTGCGCGAGAGAAAGGTCTGCGCGCTCTGGGATATCGCCAATCCGGACAAGTTCACCGGTTCGCCGCTGG
GTCGCTAG

Upstream 100 bases:

>100_bases
TGAACAGCCCGGACAGGCCGTCGAGGTAGCTGTTGCCGCGGTCGTCGTAGATGGTGACGCCGTGGCCGCGGGTGATGATC
GGCGGCGTGATGTCCGGGCC

Downstream 100 bases:

>100_bases
TTTCCGTGTCGCCCGTGGCCCACGGGATGCGGCACGCGTCACCGGAATTGAAGCCCTGCTCGGTGATGCCGAGCGCCGCG
TTCACCCGCGCCCGCATGTT

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; Sigma-; ECF Family RNA Polymerase Sigma Factor; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; ECF-Family RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; ECF-Family Protein RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase; Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase ECF-Type Sigma Factor SigJ; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPGEVQPEVLMSVAYRLTGTVADAEDIVQDAWLRRHGQDGAITDLRAWLTTVVSRLGLDRLRSATHRRETYTGNWLPEPV
VTGLGPHSGADPLAAVVAGEDARFAAMVVLERLSPDQRVAFVLHDGFAVPFSEVAEVLGTSEAAARQLASRARKVVSAQP
PPEPDPSHDEVVGQLMAAMAAGNLEAVVALLHPDVMFTGDSNGKAPTAVQVIHGADKVVRFMLGLARRYGPGFYSAYQLG
LVNGELGIYTAGLPGGDGYREMCPRIMAMTVRERKVCALWDIANPDKFTGSPLGR

Sequences:

>Translated_295_residues
MPGEVQPEVLMSVAYRLTGTVADAEDIVQDAWLRRHGQDGAITDLRAWLTTVVSRLGLDRLRSATHRRETYTGNWLPEPV
VTGLGPHSGADPLAAVVAGEDARFAAMVVLERLSPDQRVAFVLHDGFAVPFSEVAEVLGTSEAAARQLASRARKVVSAQP
PPEPDPSHDEVVGQLMAAMAAGNLEAVVALLHPDVMFTGDSNGKAPTAVQVIHGADKVVRFMLGLARRYGPGFYSAYQLG
LVNGELGIYTAGLPGGDGYREMCPRIMAMTVRERKVCALWDIANPDKFTGSPLGR
>Mature_294_residues
PGEVQPEVLMSVAYRLTGTVADAEDIVQDAWLRRHGQDGAITDLRAWLTTVVSRLGLDRLRSATHRRETYTGNWLPEPVV
TGLGPHSGADPLAAVVAGEDARFAAMVVLERLSPDQRVAFVLHDGFAVPFSEVAEVLGTSEAAARQLASRARKVVSAQPP
PEPDPSHDEVVGQLMAAMAAGNLEAVVALLHPDVMFTGDSNGKAPTAVQVIHGADKVVRFMLGLARRYGPGFYSAYQLGL
VNGELGIYTAGLPGGDGYREMCPRIMAMTVRERKVCALWDIANPDKFTGSPLGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31621; Mature: 31490

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGEVQPEVLMSVAYRLTGTVADAEDIVQDAWLRRHGQDGAITDLRAWLTTVVSRLGLDR
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHH
LRSATHRRETYTGNWLPEPVVTGLGPHSGADPLAAVVAGEDARFAAMVVLERLSPDQRVA
HHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCEEE
FVLHDGFAVPFSEVAEVLGTSEAAARQLASRARKVVSAQPPPEPDPSHDEVVGQLMAAMA
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AGNLEAVVALLHPDVMFTGDSNGKAPTAVQVIHGADKVVRFMLGLARRYGPGFYSAYQLG
CCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEE
LVNGELGIYTAGLPGGDGYREMCPRIMAMTVRERKVCALWDIANPDKFTGSPLGR
EEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PGEVQPEVLMSVAYRLTGTVADAEDIVQDAWLRRHGQDGAITDLRAWLTTVVSRLGLDR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHH
LRSATHRRETYTGNWLPEPVVTGLGPHSGADPLAAVVAGEDARFAAMVVLERLSPDQRVA
HHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCEEE
FVLHDGFAVPFSEVAEVLGTSEAAARQLASRARKVVSAQPPPEPDPSHDEVVGQLMAAMA
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AGNLEAVVALLHPDVMFTGDSNGKAPTAVQVIHGADKVVRFMLGLARRYGPGFYSAYQLG
CCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEE
LVNGELGIYTAGLPGGDGYREMCPRIMAMTVRERKVCALWDIANPDKFTGSPLGR
EEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA