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The map label for this gene is glpD2

Identifier: 41409521

GI number: 41409521

Start: 3801324

End: 3803078

Strand: Reverse

Name: glpD2

Synonym: MAP3423c

Alternate gene names: 41409521

Gene position: 3803078-3801324 (Counterclockwise)

Preceding gene: 41409522

Following gene: 41409520

Centisome position: 78.74

GC content: 69.86

Gene sequence:

>1755_bases
GTGAGCGATCCGATCCACGCACTCGGCGAGCCCGGCTCGCCGGCTTCGGCGCTGGGACCGCGGCAACGCGCGGCGGCCTG
GGACAGGCTGGGCGCCGAGCAGTTCGACGTGGTGGTGATCGGCGGCGGCGTGGTGGGATCGGGCTGCGCGCTGGACGCCG
CCACCCGCGGGCTCAAGGTTGCGCTGGTGGAGGCCCGCGACTTCGCGTCGGGCACCTCGAGCCGTTCCTCGAAGATGTTC
CACGGCGGCCTGCGCTATCTCGAGCAGCTGGAGTTCGGGCTGGTGCGCGAGGCCCTCTACGAGCGCGAGCTGTCGCTGAC
CACGCTGGCACCGCACCTGGTCAAGCCGATGCCCTTTCTGTTCCCGCTGACCAATCGGTTGTGGGAACGGCCCTACATCG
CCGCCGGCATCTTTCTCTACGACCGGCTGGGCGGGGCGAAATCCGTTCCGGCGCAAAAGCATTTGACCCGCGCCGGTGCG
CTGCGGCTGTGCCCGGGCCTCAAACGCAGCGCGCTGATCGGCGGAATCCGCTACTACGACACCATCGTCGACGACGCCCG
GCACACACTGACCGTCGCGCGCACCGCCGCGCACTACGGCGTGGTGGTGCGCAACTCCACCCAGGTGGTCGCCCTGCTGC
GGGAGGGCGACCGGGTGACCGGGGTGCGGGTGCGCGACTCCGAAGACGGCTCGGTCACCGAGGTCCGCGGGCATGTGGTG
GTCAACGCGACCGGCGTGTGGACCGACGAGATCCAGGCATTGTCCAAGCAGCGCGGGCGATTTCAGGTGCGGGCATCCAA
GGGGGTGCACGTGGTGGTGCCGCGCGACCGCATCGTCAGCGACGTGGCGATCATCCTGCGCACCGAGAAGTCGGTGATGT
TCGTCATCCCGTGGGGCAGCCACTGGATCATCGGAACCACCGACACCGACTGGGATCTGGACCTGGCCCACCCCGCGGCC
ACCAAGGCCGACATCGACTACATCCTGTCCACCGTCAACACCGTGCTGGCCATACCCCTCACCCACGCCGACATCGACGG
GGTGTATGCGGGGCTGCGGCCGCTGCTGGCCGGGGAGAGCGAGGAAACATCCAAGCTCTCCCGCGAGCACGCGGTGGCGG
TGCCCGCACCCGGCTTGGTGGCCATCGCCGGCGGCAAGTACACCACCTACCGGGTGATGGCTGCCGACGCGATTGATGCT
GCGGCGCAATTCATTCCGGCCCGGGTGGCGCCGTCGATCACGGAGAAGGTCAGCCTGCTGGGGGCCGACGGCTACTGCGC
GCTGATCAATCAGGCCGAGCACGTCGCGCAGCTGCGCGGGTTGCATCCCTACCGGGTGCGCCACCTGCTGGACCGCTACG
GCTCGCTGATCGGTGACGTGCTGGCGCTGGCCGCCGATCGGCCCGACCTGCTCAACCCGATCACGGAGGCGCCGGGCTAT
CTGCGGGTGGAGGCGCTGTACGCCGTAACCGCCGAGGGCGCTTTGCATTTGGAGGACATCCTGGCCCGCCGGATGCGCAT
CTCCATCGAATACTCGCATCGTGGCGTCGACTGTGCCCGCGAGGTGGCCGACGTGGTCGCGCCGGTGCTGGGGTGGACGG
CCGGCGACGTCGAGCGCGAGGTGGCCAACTACACCGCCCGGGTGCAGGCCGAGATCCTGTCGCAGGCCCAGCCCGACGAC
GTGTCGGCCGACGAGCTGCGCGCCAGCGCGCCCGAGGCGCGCGCCGAGATCCTCGAGCCGGTGCCGCTCAATTGA

Upstream 100 bases:

>100_bases
CCGAGGCGGCCCGGCGGCTGATGGCCCACGACGACCTGGACTAACGGTTAGCCTTGGTGCAGCACGCCCTACTGACGAGT
AACCGGACAGGAGCCCTGCA

Downstream 100 bases:

>100_bases
GACCGGCGCCGCTGCCGGTTCGCGACGGGCTGGGACCCGCCCGGGTGCGGCTGCGCGGCGGTCCGGTGCTGGCCGAGCTC
ACCGCCCGGTTCGGCGCCGC

Product: GlpD2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSDPIHALGEPGSPASALGPRQRAAAWDRLGAEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDFASGTSSRSSKMF
HGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPMPFLFPLTNRLWERPYIAAGIFLYDRLGGAKSVPAQKHLTRAGA
LRLCPGLKRSALIGGIRYYDTIVDDARHTLTVARTAAHYGVVVRNSTQVVALLREGDRVTGVRVRDSEDGSVTEVRGHVV
VNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAIILRTEKSVMFVIPWGSHWIIGTTDTDWDLDLAHPAA
TKADIDYILSTVNTVLAIPLTHADIDGVYAGLRPLLAGESEETSKLSREHAVAVPAPGLVAIAGGKYTTYRVMAADAIDA
AAQFIPARVAPSITEKVSLLGADGYCALINQAEHVAQLRGLHPYRVRHLLDRYGSLIGDVLALAADRPDLLNPITEAPGY
LRVEALYAVTAEGALHLEDILARRMRISIEYSHRGVDCAREVADVVAPVLGWTAGDVEREVANYTARVQAEILSQAQPDD
VSADELRASAPEARAEILEPVPLN

Sequences:

>Translated_584_residues
MSDPIHALGEPGSPASALGPRQRAAAWDRLGAEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDFASGTSSRSSKMF
HGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPMPFLFPLTNRLWERPYIAAGIFLYDRLGGAKSVPAQKHLTRAGA
LRLCPGLKRSALIGGIRYYDTIVDDARHTLTVARTAAHYGVVVRNSTQVVALLREGDRVTGVRVRDSEDGSVTEVRGHVV
VNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAIILRTEKSVMFVIPWGSHWIIGTTDTDWDLDLAHPAA
TKADIDYILSTVNTVLAIPLTHADIDGVYAGLRPLLAGESEETSKLSREHAVAVPAPGLVAIAGGKYTTYRVMAADAIDA
AAQFIPARVAPSITEKVSLLGADGYCALINQAEHVAQLRGLHPYRVRHLLDRYGSLIGDVLALAADRPDLLNPITEAPGY
LRVEALYAVTAEGALHLEDILARRMRISIEYSHRGVDCAREVADVVAPVLGWTAGDVEREVANYTARVQAEILSQAQPDD
VSADELRASAPEARAEILEPVPLN
>Mature_583_residues
SDPIHALGEPGSPASALGPRQRAAAWDRLGAEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDFASGTSSRSSKMFH
GGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPMPFLFPLTNRLWERPYIAAGIFLYDRLGGAKSVPAQKHLTRAGAL
RLCPGLKRSALIGGIRYYDTIVDDARHTLTVARTAAHYGVVVRNSTQVVALLREGDRVTGVRVRDSEDGSVTEVRGHVVV
NATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAIILRTEKSVMFVIPWGSHWIIGTTDTDWDLDLAHPAAT
KADIDYILSTVNTVLAIPLTHADIDGVYAGLRPLLAGESEETSKLSREHAVAVPAPGLVAIAGGKYTTYRVMAADAIDAA
AQFIPARVAPSITEKVSLLGADGYCALINQAEHVAQLRGLHPYRVRHLLDRYGSLIGDVLALAADRPDLLNPITEAPGYL
RVEALYAVTAEGALHLEDILARRMRISIEYSHRGVDCAREVADVVAPVLGWTAGDVEREVANYTARVQAEILSQAQPDDV
SADELRASAPEARAEILEPVPLN

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=557, Percent_Identity=34.6499102333932, Blast_Score=298, Evalue=1e-80,
Organism=Homo sapiens, GI285002231, Length=557, Percent_Identity=34.6499102333932, Blast_Score=298, Evalue=1e-80,
Organism=Escherichia coli, GI2367226, Length=466, Percent_Identity=33.0472103004292, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1788574, Length=386, Percent_Identity=29.5336787564767, Blast_Score=116, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17509253, Length=594, Percent_Identity=32.8282828282828, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI115534726, Length=523, Percent_Identity=32.887189292543, Blast_Score=239, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6322036, Length=602, Percent_Identity=31.5614617940199, Blast_Score=220, Evalue=4e-58,
Organism=Drosophila melanogaster, GI161077125, Length=547, Percent_Identity=35.1005484460695, Blast_Score=272, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24653942, Length=547, Percent_Identity=35.1005484460695, Blast_Score=272, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24653944, Length=547, Percent_Identity=35.1005484460695, Blast_Score=272, Evalue=6e-73,
Organism=Drosophila melanogaster, GI20130025, Length=547, Percent_Identity=35.1005484460695, Blast_Score=272, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24586295, Length=529, Percent_Identity=32.1361058601134, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI19921278, Length=512, Percent_Identity=30.2734375, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI45550977, Length=361, Percent_Identity=26.3157894736842, Blast_Score=121, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 63030; Mature: 62898

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPIHALGEPGSPASALGPRQRAAAWDRLGAEQFDVVVIGGGVVGSGCALDAATRGLKV
CCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEEECCEECCCCCHHHHCCCEEE
ALVEARDFASGTSSRSSKMFHGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPMPFL
EEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
FPLTNRLWERPYIAAGIFLYDRLGGAKSVPAQKHLTRAGALRLCPGLKRSALIGGIRYYD
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHCCCCCHHHHHCCHHHHH
TIVDDARHTLTVARTAAHYGVVVRNSTQVVALLREGDRVTGVRVRDSEDGSVTEVRGHVV
HHHHCCHHHHHHHHHHHHEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCEEEEECEEE
VNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAIILRTEKSVMFVIPWGS
EEECCCCHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHEEEEEEECCCEEEEEECCC
HWIIGTTDTDWDLDLAHPAATKADIDYILSTVNTVLAIPLTHADIDGVYAGLRPLLAGES
EEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCC
EETSKLSREHAVAVPAPGLVAIAGGKYTTYRVMAADAIDAAAQFIPARVAPSITEKVSLL
HHHHHHHHHCEEECCCCCEEEEECCCEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHC
GADGYCALINQAEHVAQLRGLHPYRVRHLLDRYGSLIGDVLALAADRPDLLNPITEAPGY
CCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHCCCCC
LRVEALYAVTAEGALHLEDILARRMRISIEYSHRGVDCAREVADVVAPVLGWTAGDVERE
EEEEEEEEEECCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHH
VANYTARVQAEILSQAQPDDVSADELRASAPEARAEILEPVPLN
HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SDPIHALGEPGSPASALGPRQRAAAWDRLGAEQFDVVVIGGGVVGSGCALDAATRGLKV
CCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEEECCEECCCCCHHHHCCCEEE
ALVEARDFASGTSSRSSKMFHGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPMPFL
EEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
FPLTNRLWERPYIAAGIFLYDRLGGAKSVPAQKHLTRAGALRLCPGLKRSALIGGIRYYD
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHCCCCCHHHHHCCHHHHH
TIVDDARHTLTVARTAAHYGVVVRNSTQVVALLREGDRVTGVRVRDSEDGSVTEVRGHVV
HHHHCCHHHHHHHHHHHHEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCEEEEECEEE
VNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAIILRTEKSVMFVIPWGS
EEECCCCHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHEEEEEEECCCEEEEEECCC
HWIIGTTDTDWDLDLAHPAATKADIDYILSTVNTVLAIPLTHADIDGVYAGLRPLLAGES
EEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCC
EETSKLSREHAVAVPAPGLVAIAGGKYTTYRVMAADAIDAAAQFIPARVAPSITEKVSLL
HHHHHHHHHCEEECCCCCEEEEECCCEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHC
GADGYCALINQAEHVAQLRGLHPYRVRHLLDRYGSLIGDVLALAADRPDLLNPITEAPGY
CCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHCCCCC
LRVEALYAVTAEGALHLEDILARRMRISIEYSHRGVDCAREVADVVAPVLGWTAGDVERE
EEEEEEEEEECCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHH
VANYTARVQAEILSQAQPDDVSADELRASAPEARAEILEPVPLN
HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]