| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is maf
Identifier: 41409499
GI number: 41409499
Start: 3776986
End: 3777618
Strand: Direct
Name: maf
Synonym: MAP3401
Alternate gene names: 41409499
Gene position: 3776986-3777618 (Clockwise)
Preceding gene: 41409498
Following gene: 41409500
Centisome position: 78.2
GC content: 72.99
Gene sequence:
>633_bases TTGACCCGCCTGGTGCTGGCCTCGGCCTCGGCCGGCCGGCTCAAGGTGCTGCGCCAGGCGGGGGTGGATCCGCTGGTCGT GGTGTCCGGGGTGGACGAGGACGCGGTGATCGCCGCGCTGGGGCCGGATGCGTCGCCAAGCGCCGTGGTGTGCGCGCTGG CGACGGCCAAGGCCGACCGGGTGGCCGGCGCACTTCAGGCCGGCGTCGCCGCCGATTGCGTTGTGGTCGGCTGTGATTCG ATGCTGTTCATCGACGGCGGGCTGTGCGGCAAACCGGGCTCGGCCGACGCCGCGCTGCGCCAGTGGCGCCGCATCGGCGG GCGGTCCGGCGGGCTGTACACCGGGCACTGCCTGTTGCGGCTGCGCGACGGCGATATCACCCACCGCGAAGTCGAATCAG CTTGCACCACAGTGCATTTCGCCTCTCCCGTCGAGGCGGATCTGCGGGCGTACGTGGCCGGCGGGGAGCCGCTGGCGGTG GCCGGCGGCTTCACCCTGGACGGCCTGGGCGGCTGGTTCGTCGACGGGATCGACGGCGACCCGTCCAACGTGATCGGCGT CAGCCTGCCGCTGCTGCGGACCCTGCTGACGCGGGTGGGGTTATCGGTGTCCGCGCTGTGGGCGGCCGACTGA
Upstream 100 bases:
>100_bases AGCCCGAGAAGACCCGCTGGGGTCTTCCGGTCGACCGGCTGCGCTTCGCGATGTCCAACTACCAGCGGCTGACCATGCAG CAGATGACGCACCTGAGGCG
Downstream 100 bases:
>100_bases CGCCCAACGTCGAGCCAACTGACGCCCAACGTCGAGTTGTTGGGCCGAAAACCCGAAATTCCCGACAACAAGTCGACGTT GGCGCGCCGTGCCACCGACA
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTRLVLASASAGRLKVLRQAGVDPLVVVSGVDEDAVIAALGPDASPSAVVCALATAKADRVAGALQAGVAADCVVVGCDS MLFIDGGLCGKPGSADAALRQWRRIGGRSGGLYTGHCLLRLRDGDITHREVESACTTVHFASPVEADLRAYVAGGEPLAV AGGFTLDGLGGWFVDGIDGDPSNVIGVSLPLLRTLLTRVGLSVSALWAAD
Sequences:
>Translated_210_residues MTRLVLASASAGRLKVLRQAGVDPLVVVSGVDEDAVIAALGPDASPSAVVCALATAKADRVAGALQAGVAADCVVVGCDS MLFIDGGLCGKPGSADAALRQWRRIGGRSGGLYTGHCLLRLRDGDITHREVESACTTVHFASPVEADLRAYVAGGEPLAV AGGFTLDGLGGWFVDGIDGDPSNVIGVSLPLLRTLLTRVGLSVSALWAAD >Mature_209_residues TRLVLASASAGRLKVLRQAGVDPLVVVSGVDEDAVIAALGPDASPSAVVCALATAKADRVAGALQAGVAADCVVVGCDSM LFIDGGLCGKPGSADAALRQWRRIGGRSGGLYTGHCLLRLRDGDITHREVESACTTVHFASPVEADLRAYVAGGEPLAVA GGFTLDGLGGWFVDGIDGDPSNVIGVSLPLLRTLLTRVGLSVSALWAAD
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=192, Percent_Identity=34.8958333333333, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI291045183, Length=191, Percent_Identity=32.4607329842932, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI310133124, Length=139, Percent_Identity=33.0935251798561, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI291045181, Length=141, Percent_Identity=34.7517730496454, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI87081830, Length=201, Percent_Identity=30.8457711442786, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1789646, Length=194, Percent_Identity=34.5360824742268, Blast_Score=85, Evalue=4e-18, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=31.7708333333333, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI78706856, Length=192, Percent_Identity=27.6041666666667, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3401_MYCPA (Q73UG7)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962335.1 - HSSP: Q02169 - ProteinModelPortal: Q73UG7 - SMR: Q73UG7 - EnsemblBacteria: EBMYCT00000039219 - GeneID: 2720686 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3401 - NMPDR: fig|262316.1.peg.3401 - GeneTree: EBGT00050000015014 - HOGENOM: HBG414045 - OMA: VVGCDSM - ProtClustDB: PRK00148 - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 21263; Mature: 21131
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: ACT_SITE 33-33
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLVLASASAGRLKVLRQAGVDPLVVVSGVDEDAVIAALGPDASPSAVVCALATAKADR CCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEHHHHHHH VAGALQAGVAADCVVVGCDSMLFIDGGLCGKPGSADAALRQWRRIGGRSGGLYTGHCLLR HHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEE LRDGDITHREVESACTTVHFASPVEADLRAYVAGGEPLAVAGGFTLDGLGGWFVDGIDGD EECCCCCHHHHHHHHHEEEECCCCCCCCEEEECCCCEEEEECCCEECCCCCEEEECCCCC PSNVIGVSLPLLRTLLTRVGLSVSALWAAD CCCEEEEHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure TRLVLASASAGRLKVLRQAGVDPLVVVSGVDEDAVIAALGPDASPSAVVCALATAKADR CEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEHHHHHHH VAGALQAGVAADCVVVGCDSMLFIDGGLCGKPGSADAALRQWRRIGGRSGGLYTGHCLLR HHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEE LRDGDITHREVESACTTVHFASPVEADLRAYVAGGEPLAVAGGFTLDGLGGWFVDGIDGD EECCCCCHHHHHHHHHEEEECCCCCCCCEEEECCCCEEEEECCCEECCCCCEEEECCCCC PSNVIGVSLPLLRTLLTRVGLSVSALWAAD CCCEEEEHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA